Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00471 ATGAAAACCACTATGGAGTTTGCATTTCTTGTTAGTCTGATTTTCATTCTCTGCAGCATCAGCACACATATATTTGTAGTTTCTGCAGAGGAGAATCAAGAAAATGATGATCACAACTTAGTCACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGATTCATTTCAATCAGAAGATTTGCATGGTTGGTACCATTCATTCCTGCCACAAACTTTTGCTCACAAAGAAAGAATGGTTTTCACTTACCGTAACGTAGCCTCTGGATTCGCTGTGAAGTTAACCGCTGAAGAAGCAAAATCTCTTCAAGAGAAAAATGAAGTTGTGTCAGCAAGACCTGAAAGAACACTTTCATTACACACAACTCACACTCCAACTTTCTTGGGACTGAAACAAGGACAAGGATTGTGGAGCGATGATAACCTCGGAAAAGGCGTAATAATTGGACTCATAGACACCGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATACCGCCACCACCTGCAAAATGGAAAGGCCACTGTGAATTCACTGGTGGCACAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGACAAAAGTGCAATTCAAGAGCCTCCATTTGAAACCTTAATATTCCATGGAACACACACTGCTGCAGAGGCAGCAGGAAGATTCATAGAAGATGCAAGTGTTTTCGGTAATGCTAAAGGTGTAGCAGCTGGTATGGCACCACATGCTCACATAGCAATGTACAAAGTTTGTGCTAGTGGCACTCGAGAATGCTACGAAAGTTCTATCTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCCCTCTCTCTTGGTTTGGATTCTACTGTTTCATTTTTTGAAGACCCAATTGCAATTGGTGCATTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAATTCCGGCCCTGAATACAGCACTATCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCAAGCACAATTGATCGAAAAATTGTAGCATCAGCTAAACTAGGAAATGGAGATGAATTTGAAGGTGAAACATTATTCCAACCCAAAGACTTTCCTCAACAATTATTGCCACTTGTGTATGCAGGTTCAAATGGTATTTCAAGCCAGAACCAGAATCAATCCTTCTGTCTTCCAGGTTCCTTAAAGAACATTGATGTAAGAGGCAAAGTAGTGTTGTGTGATATAGGTGGCGGTGTTTCAAGTGTTGTCAAAGGACAAGAAGTTCTAAATTCAGGCGGTGTGGCGATGATCCTTGCAAACTCAGAAGCTTTTGGATTCAGTACATTTGCTATCGCGCATGTTCTGCCGGCTGTTGATGTGAGTAATGCAGCTGGTTTAACAATAAAAAATTACATAAACTCAACCTACAATCCAACAGCTACAGTACTATTCAAAGGAACGGTAATCGGTGATTCACTTGCTCCATCTGTTGTTTCATTTTCTTCTAGAGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATAGGACCAGGTGTCAACATTCTAGCTGCTTGGGCTATTTCTGTTGACAACGAACTCCCACCTTATAACATTATTTCCGGTACTTCAATGTCTTGTCCTCATCTAAGTGGTATTGCTGCATTAATCAAAAGCTCTCACCCTGATTGGTCACCGGCCGCTATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGTACTGCTATAACGGATCAAAGACGTTTACCTGCTGATGTTTTCGCTACTGGTGCGGGACATGTTAATCCTGTTAAAGCAAATGATCCCGGTCTTATTTATGATATTCAACCTGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCCAATAAAGAGATTGAAGTTATTGTTCAGTGGAAAGTGAAGTGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAACTATCCATCTTTTTCGATTCTGTTGGGGTCTGAGTCACAGTTTTATACAAGAACTTTGACTAATGTTGGACCTGTAAATGCTACTTATAGAGTTGAACTTGAAGTACCTTTGGCTTTGGGTATGAGTGTAAATCCTAGTGAAATAACATTTACTGAGGTCAATGAGAAAGTTAGTTTCTCAGTGGATTTTATACCACAAATTAAGGAAAATAGAGGGAACCATACTCTTGCTCAGGGCTCTCTCACATGGGTATCTGATAAACATGCTGTTAGGATTCCCATATCTGTGATTTTCAAGTGA 2274 0.3989 MKTTMEFAFLVSLIFILCSISTHIFVVSAEENQENDDHNLVTYIVHVKKSENVDSFQSEDLHGWYHSFLPQTFAHKERMVFTYRNVASGFAVKLTAEEAKSLQEKNEVVSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGLIDTGIYPFHPSFNDEGIPPPPAKWKGHCEFTGGTTCNNKLIGARNLDKSAIQEPPFETLIFHGTHTAAEAAGRFIEDASVFGNAKGVAAGMAPHAHIAMYKVCASGTRECYESSILAAMDIAIEDGVDVLSLSLGLDSTVSFFEDPIAIGAFAATQKGVFVSCSAANSGPEYSTISNEAPWILTVGASTIDRKIVASAKLGNGDEFEGETLFQPKDFPQQLLPLVYAGSNGISSQNQNQSFCLPGSLKNIDVRGKVVLCDIGGGVSSVVKGQEVLNSGGVAMILANSEAFGFSTFAIAHVLPAVDVSNAAGLTIKNYINSTYNPTATVLFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIISGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTAITDQRRLPADVFATGAGHVNPVKANDPGLIYDIQPEDYVPYLCGLGYSNKEIEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGPVNATYRVELEVPLALGMSVNPSEITFTEVNEKVSFSVDFIPQIKENRGNHTLAQGSLTWVSDKHAVRIPISVIFK 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00471 757 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 148 159 IPR023827 -
Trre10g00471 757 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Trre10g00471 757 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Trre10g00471 757 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Trre10g00471 757 Pfam Peptidase inhibitor I9 42 120 IPR010259 -
Trre10g00471 757 Pfam Subtilase family 143 578 IPR000209 GO:0006508|GO:0008236
Trre10g00471 757 CDD PA_subtilisin_like 349 478 - -
Trre10g00471 757 Gene3D Peptidase S8/S53 domain 145 622 IPR036852 GO:0004252|GO:0006508
Trre10g00471 757 Gene3D - 626 756 - -
Trre10g00471 757 Gene3D - 341 486 - -
Trre10g00471 757 ProSiteProfiles Serine proteases, subtilase domain profile. 127 609 - -
Trre10g00471 757 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 43 754 IPR045051 -
Trre10g00471 757 CDD Peptidases_S8_3 119 576 IPR034197 -
Trre10g00471 757 Pfam PA domain 373 463 IPR003137 -
Trre10g00471 757 Pfam Fibronectin type-III domain 656 754 IPR041469 -
Trre10g00471 757 FunFam subtilisin-like protease SBT1.5 341 485 - -
Trre10g00471 757 SUPERFAMILY Subtilisin-like 119 613 IPR036852 GO:0004252|GO:0006508
Trre10g00471 757 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 26 120 IPR037045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00471 Trre-Chr10 3156548 3158821 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00471 9 757 Subtilisin-like Serine Gene Family AT1G04110 42.642 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00471 - - gmx:100783595 1146.34