Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00470 ATGATAAAAACCAACTACACAATGAAGCTTGCATTGCTTGTTGGTCTCATTTTCATTCTCTGCAGCATCAACCAAATTACATCAGTACTTGCTGCACAAGATGATGATCAGAACTTAATGACATACATTGTTCATGTCAAAAAATCAGAAAATGTTGCTTCTTTTCAATCAGAAGATTTCCATAACTTTTATCATTCATTTCTACCACAAACTTTTGCTCACAAAGAGAGAATGGTTTTCACTTACCGCAACGTAGCCTCTGGATTCGCTGTGAAGTTGACACCAGAAGAAGCCAAATCTCTTCAAGAAAAAGGTGAAATTTTGTCAGCAAGACCTGAAAGAACACTTTCATTACACACAACTCATACTCCAACTTTCTTGGGGTTAAAGCAAGGACAGGGATTGTGGAGTGATGATAATCTTGGAAAAGGCGTTATCATTGGAGTCATAGACACAGGAATATACCCTTTTCATCCATCATTCAACGACGAAGGAATGCCACCACCACCTGCAAAATGGAAAGGACATTGTGAATTCACCGGAAAAGCAACATGCAACAATAAGCTCATAGGTGCAAGAAATTTAGTCAAAAGTGCACTTCAAGAGCCACCATTGGAAAATTTCTTCCATGGAACACACACTGCTGCTGAGGCTGCGGGAAGATTCGTAGAAGATGCAAGTGTTTTTGGAAATGCTAAAGGTGTAGCAGCTGGTATGGCACCTAATGCTCACTTAGCAATGTACAAAGTTTGTAATGACAAAATTGGATGCACTGAAAGTGCTATTTTAGCTGCAATGGATATAGCTATTGAAGATGGTGTAGATGTTCTTTCACTCTCTCTTGGTTTAGGCTCTCTTTCATTTTTTGAAGACCCTATTGCAATTGGTGCTTTTGCTGCTACACAAAAAGGAGTTTTTGTTAGTTGTTCTGCTGCAAACTCCGGCCCCGAATACAGTACTCTCTCAAATGAAGCTCCTTGGATCCTCACAGTAGGTGCTAGCACAATTGACAGAAAAATTGTAGCATTAGCAAAGCTAGGAAATGGAAATGAATTTGAAGGTGAAACATTGTTCCAACCCAAAGACTTTTCTCAACAATTATTGCCACTTGTTTATGCAGGTTCAAATGGAAATTCAAACCAGAACCAAAATCAGTCCCTCTGTCTTCCAGGTTCCTTAAAGAACATTGATGTAAGTGGAAAAGTAGTGTTGTGTGATGCAGGTGGAGGTGTTCCAAGTGTTGTCAAAGGACAAGAAGTTCTAAATTCAGGTGGTGTCGCCATGATCCTTGCAAACATAGAAGCTGTTGGATTCAGCACTTTCGCTATTGGTCATGTTCTTCCAGCTGTTGATGTGAGTTATGCAGCTGGTTTAACAATAAAAAATTACATAAACTCAACCTACAATCCAACAGCAACAGTACTATTCAAAGGAACCGTAATCGGTGATTCACTTGCTCCTTCTGTAGTTTCATTTTCTTCAAGAGGACCAAGTCAAGAAAGTCCTGGAATTCTAAAACCAGACATCATTGGACCAGGTGTCAACATTCTAGCCGCTTGGGCTATTTCTGTGGACAACGAACTCCCACCTTATAACATTGTTTCCGGTACTTCAATGTCTTGTCCTCACCTAAGTGGTATTGCTGCATTGATCAAAAGTTCTCACCCTGATTGGTCACCAGCCGCAATAAAATCAGCAATCATGACAACTGCTAATACTCTCAACCTCGGCGGTACTCCTATAACGGATCAAAGACGTTTACCTGCTGATGTTTTCGCTACTGGTGCGGGACATGTTAATCCTGTTAAAGCAAATGATCCTGGTCTTGTTTATGATATTCAACCGGAAGATTATGTTCCTTATTTGTGTGGTTTGGGTTATTCTGATAGAGAGATTGAAGTTATTGTTCAATGGAAAGTGAAATGTTCTGATGTGAAAAGTATACCAGAAGCACAACTGAACTATCCTTCTTTTTCGATTCTGTTGGGGTCCGAGTCGCAGTTTTATACAAGAACTCTGACTAATGTTGGTTTTGCAAATTCTACATATAGAGTTGAACTTGATGTGCCTTTGGCTTTAGGCATGAGTGTTAATCCTAGTGAAATAACATTTAGTGAGATTAATGAGAAGGTTAGTTACTCGGTCGATTTTATACCACAAGTTAAGGAAAATAGAGGTAACCATACTTTTGCTCAGGGTTCACTCACTTGGATATCTGATAAACATGCTGTTAGGGTACCTATTTCTGTGATTTTCAAGTGA 2262 0.3943 MIKTNYTMKLALLVGLIFILCSINQITSVLAAQDDDQNLMTYIVHVKKSENVASFQSEDFHNFYHSFLPQTFAHKERMVFTYRNVASGFAVKLTPEEAKSLQEKGEILSARPERTLSLHTTHTPTFLGLKQGQGLWSDDNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGKATCNNKLIGARNLVKSALQEPPLENFFHGTHTAAEAAGRFVEDASVFGNAKGVAAGMAPNAHLAMYKVCNDKIGCTESAILAAMDIAIEDGVDVLSLSLGLGSLSFFEDPIAIGAFAATQKGVFVSCSAANSGPEYSTLSNEAPWILTVGASTIDRKIVALAKLGNGNEFEGETLFQPKDFSQQLLPLVYAGSNGNSNQNQNQSLCLPGSLKNIDVSGKVVLCDAGGGVPSVVKGQEVLNSGGVAMILANIEAVGFSTFAIGHVLPAVDVSYAAGLTIKNYINSTYNPTATVLFKGTVIGDSLAPSVVSFSSRGPSQESPGILKPDIIGPGVNILAAWAISVDNELPPYNIVSGTSMSCPHLSGIAALIKSSHPDWSPAAIKSAIMTTANTLNLGGTPITDQRRLPADVFATGAGHVNPVKANDPGLVYDIQPEDYVPYLCGLGYSDREIEVIVQWKVKCSDVKSIPEAQLNYPSFSILLGSESQFYTRTLTNVGFANSTYRVELDVPLALGMSVNPSEITFSEINEKVSYSVDFIPQVKENRGNHTFAQGSLTWISDKHAVRVPISVIFK 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00470 753 Gene3D Peptidase S8/S53 domain 144 618 IPR036852 GO:0004252|GO:0006508
Trre10g00470 753 Gene3D - 622 752 - -
Trre10g00470 753 Gene3D - 337 482 - -
Trre10g00470 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
Trre10g00470 753 Pfam PA domain 369 459 IPR003137 -
Trre10g00470 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 25 119 IPR037045 -
Trre10g00470 753 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Trre10g00470 753 PRINTS Subtilisin serine protease family (S8) signature 535 551 IPR015500 -
Trre10g00470 753 PRINTS Subtilisin serine protease family (S8) signature 206 219 IPR015500 -
Trre10g00470 753 ProSiteProfiles Serine proteases, subtilase domain profile. 126 605 - -
Trre10g00470 753 CDD PA_subtilisin_like 345 474 - -
Trre10g00470 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 42 750 IPR045051 -
Trre10g00470 753 Pfam Peptidase inhibitor I9 41 119 IPR010259 -
Trre10g00470 753 SUPERFAMILY Subtilisin-like 118 609 IPR036852 GO:0004252|GO:0006508
Trre10g00470 753 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 147 158 IPR023827 -
Trre10g00470 753 FunFam subtilisin-like protease SBT1.5 337 481 - -
Trre10g00470 753 CDD Peptidases_S8_3 118 572 IPR034197 -
Trre10g00470 753 Pfam Subtilase family 142 578 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00470 Trre-Chr10 3151656 3153917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00470 2 750 Subtilisin-like Serine Gene Family AT5G67360 43.943 0.0 582
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00470 - - gmx:100783595 1191.02