Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00469 ATGACCTTAACTAAAATGGAACTAACTCCAATACTATTGATTCTTGGTTTCATTCTTGTGCTAAGTATCTATCCAACTTCAGCACATAATAAATACCAAGAATTCATAGCAGCAAATGAACAACTAAAAGATGATAGTAACTTATTGACTTACATTGTTCATGTCAACAAGCCTTCCCTTCAATCTGAGGAGAGTTTGCATGGTTGGTATCATTCACTCTTGCCAGATACTACTAAAACTCCAAACCAACGACGCGTTATTTTCTCATACCGAAACATAGTTGATGGATTTGCGGTGAAATTGACTGCGGAAGAAGCCAAGGCTCTAGAAGAGAAGGAGCAGGTTCTGTCAACTCGACCGGAGAAAATATTTTCGTTACACACAACTCATACTCCGAGCTTCTTAGGGTTGCAGAAGAATCAAGAATTGTGGCAAAATTCCAATCTCGGTAAAGGGATCATAATTGGAGTACTGGACACAGGAATATACCCTTTGCATCCTTCTTTTTCTGACGAAGGAATGTCGCCTCCACCTGCAAAATGGAATGGTCATTGTGAATTCACAGGGAAGAGGATTTGTAACAATAAGCTCATTGGAGCAAGGAACTTTGCAAATTCATCCCTCCCGTTTGATTATGTTGGACACGGAACTCACACGTCCAGCACAGCTGCCGGAAGGTCCGTGCAAGGTGCCAATGTCTTTGGAAATGCTAATGGTACAGCAACTGGTATGGCACCAGATGCACACTTGGCAATGTACAAAGTATGCGGCATCTATGGTTGTGCTGAAAGTGCAATATTAGCTGGAATGGATGCTGCAGTTGATGATGGTGTTGATGTACTTTCGCTCTCCCTTGGACAACCCTCCGTGTATTTATTTGAAGATGGAATTGCACTCGGCGCATTTAGTGCAATACAAAAGGGAATTTTTGTTAGTTGTTCGGCTGGAAATTCAGGTCCTGCTTATGGTACATTAGCTAATGAAGCACCATGGATTCTAACTGTTGGTGCTAGCACAACTGACAGAAAAATAGAAGCAATAGCTAAGCTTGGAAACGGGAAGGAATATCTCGGAGAATCAGTTTTCCAACCAAAAGACTTTGCATCAACATTATTGCCACTTGTGTATGCAGGTTCACTTAATACAAGTGATGATTCCATTGCCTTTTGTAACCCTTTTACCATGCAGAACGTCGATGTTAAGGGAAAGGTAGTTTTGTGTGAGCAAGGCGGATTTGTTAAAAGAGTAGATAAAGGTCAAGCGGTTAAAGATGCTGGCGGCGCTGCTATGATACTTGTTAACAGTAAACTTGAAGCTTTCAATCCAATTGCTGATGTTCATGTTCTACCTGCAGTTCATGTAAGTTACTATGCTGGTTTATCCATCAAAGAGTATATAAACTCAACTTCAACGCCGATAGCCACAATTATATTCAAAGGAACTGTTATTGGAAATCCACTTGCCCCTCAAGTTGCTTCATTTTCATCAAGAGGTCCAAGCAAATCAAGCCCTGGAATTCTTAAACCTGACATAATTGGACCTGGATTGAACATTCTAGCAGCATGGCCTGTATCGTTAGGCAATAGTACTACACCGCCGTTTAACATAATTTCAGGTACCTCAATGTCTTGTCCTCATCTCAGTGGCATCGCCGCGTTGTTGAAAAACTCTCATCCAGATTGGTCACCAGCTGCTATAAAATCAGCAATCATGACAACTGCTGATACTCTCAACCTTCATGAAAAGCCTATTTTGGACCAAAGGCTTAAACCAGCTGATTTATTTGCAGTTGGTGCCGGACATGTTAACCCTTTGAAAGCGAACGATCCAGGACTTGTTTATGATATTGAAACAAATGATTACGTTCCTTATTTGTGTGGTTTGAATTATACTGATAGACAAGTTGGAGTTATTTTGCAACAGAAAGTGAAATGTTCCGAGGTAAAGAGCATACCACAGGCACAACTTAATTATCCATCATTTTCAATTATTTTAGGATCTTCTTCACAGTATTATACTAGAACATTGACAAACGTTGGACCTGTTAACACAACATACAACGTGGTAATTGATGCGCCTTTAGCGGTCGGTATAAGTGTAGGACCGTCTCAAATAACATTCACTGAGGTGAAGCAAAAGGTTACATACTTCGTTGATTTTGTACCCGAAGACGAAAAGATTAGAGATGATAACATGATTGCTCAGGGTTCTATCAAATGGGTTTCTGGAAAGTATTCTGTTAGCATTCCTATATCTGTCATCTTTGTGTGA 2271 0.4038 MTLTKMELTPILLILGFILVLSIYPTSAHNKYQEFIAANEQLKDDSNLLTYIVHVNKPSLQSEESLHGWYHSLLPDTTKTPNQRRVIFSYRNIVDGFAVKLTAEEAKALEEKEQVLSTRPEKIFSLHTTHTPSFLGLQKNQELWQNSNLGKGIIIGVLDTGIYPLHPSFSDEGMSPPPAKWNGHCEFTGKRICNNKLIGARNFANSSLPFDYVGHGTHTSSTAAGRSVQGANVFGNANGTATGMAPDAHLAMYKVCGIYGCAESAILAGMDAAVDDGVDVLSLSLGQPSVYLFEDGIALGAFSAIQKGIFVSCSAGNSGPAYGTLANEAPWILTVGASTTDRKIEAIAKLGNGKEYLGESVFQPKDFASTLLPLVYAGSLNTSDDSIAFCNPFTMQNVDVKGKVVLCEQGGFVKRVDKGQAVKDAGGAAMILVNSKLEAFNPIADVHVLPAVHVSYYAGLSIKEYINSTSTPIATIIFKGTVIGNPLAPQVASFSSRGPSKSSPGILKPDIIGPGLNILAAWPVSLGNSTTPPFNIISGTSMSCPHLSGIAALLKNSHPDWSPAAIKSAIMTTADTLNLHEKPILDQRLKPADLFAVGAGHVNPLKANDPGLVYDIETNDYVPYLCGLNYTDRQVGVILQQKVKCSEVKSIPQAQLNYPSFSIILGSSSQYYTRTLTNVGPVNTTYNVVIDAPLAVGISVGPSQITFTEVKQKVTYFVDFVPEDEKIRDDNMIAQGSIKWVSGKYSVSIPISVIFV 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00469 756 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 127 IPR037045 -
Trre10g00469 756 SUPERFAMILY Subtilisin-like 126 612 IPR036852 GO:0004252|GO:0006508
Trre10g00469 756 SUPERFAMILY PA domain 373 496 IPR046450 -
Trre10g00469 756 Pfam Fibronectin type-III domain 655 753 IPR041469 -
Trre10g00469 756 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 155 166 IPR023827 -
Trre10g00469 756 Pfam Peptidase inhibitor I9 50 126 IPR010259 -
Trre10g00469 756 Gene3D - 625 755 - -
Trre10g00469 756 ProSiteProfiles Serine proteases, subtilase domain profile. 134 608 - -
Trre10g00469 756 CDD Peptidases_S8_3 126 575 IPR034197 -
Trre10g00469 756 Pfam PA domain 373 461 IPR003137 -
Trre10g00469 756 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 51 753 IPR045051 -
Trre10g00469 756 Gene3D - 341 484 - -
Trre10g00469 756 CDD PA_subtilisin_like 349 476 - -
Trre10g00469 756 Gene3D Peptidase S8/S53 domain 152 621 IPR036852 GO:0004252|GO:0006508
Trre10g00469 756 PRINTS Subtilisin serine protease family (S8) signature 150 169 IPR015500 -
Trre10g00469 756 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Trre10g00469 756 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Trre10g00469 756 FunFam subtilisin-like protease SBT1.5 341 483 - -
Trre10g00469 756 Pfam Subtilase family 150 581 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00469 Trre-Chr10 3148609 3150879 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00469 50 753 Subtilisin-like Serine Gene Family AT5G67360 45.628 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00469 - - lja:Lj2g3v2002920.1 1076.23