Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00451 ATGTTGCTTCAAAATCCACCGTTCCACACTCTCATCGTTTTGCAATCAAGTAAAAGGCTTTTCAAGAGATTTGCTGAGATTGGAAGTGTTGCTCTGATCAACTATGGAAAAGACTATGGTCGACTCGTGGTTGTAAATCAAACTAGACAACATTACCACTCCTCCTCACCCATTTCAGAGAAACCTGATGAAAACCTTCCATTAACACTGCACAGTGCGAGGAATTCATGTATACCATTTTGTGTGATATTTGAATTGGGAATACACATACACTTTGCCGCCGGTTTGAATTGA 294 0.4014 MLLQNPPFHTLIVLQSSKRLFKRFAEIGSVALINYGKDYGRLVVVNQTRQHYHSSSPISEKPDENLPLTLHSARNSCIPFCVIFELGIHIHFAAGLN 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00451 97 Gene3D - 20 54 IPR014722 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00451 Trre-Chr10 3059704 3062690 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00451 21 45 Cytoplasmic Ribosomal Protein Gene Family AT2G20450 76.000 6.13e-09 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00451 K02875 - sspl:121743309 49.2914