Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00423 ATGTGGGGTTTGTGTCTTGGAGCATTGGTTATTTTATGCATTATTACACATTGGGTTTATAGATGGAGAAATCCATGTTGCAATGGTAAACTCCCACCTGGTTCTATGGGTTTGCCACTTTTAGGTGAGACCCTTCAGTTTTTTTCTCCCTATACTTCTTCTGATATTCCTCCATTCATCAATCAGAGAATGAAAAGATATGGACCAATCTTCAAGACAAACTTGGTTGGAATACCAGTTGTAGTCTCAACAGACCCTGATCTTAATTACTTCATATTCCAACAAGAAGGGAAAAAATTTCAGAGCTGGTATCCAGATACATTCACAGAAATATTTGGGAAACAAAATGTAGAGGTTGAACAAGCAGCCTGCAGAACATTACAACAATCGTCTTGTCAGGACAGTGTTGAGCTGAAGGAAGCAACAGAAAGGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATTCAACCAAGTCCTCGGAGAATTTAAGGGAGAACTTCGTTGCATTTATACAAGGACTCGTCTCATTCCCTTTGGACATTCCAGGAACAGCTTATCACAAATGTTTGCAGGGTAGGAAAAGGGCAATGAAAATGCTGAAGAACATGCTGCAGGAAAGAAGGGAAATGCCTAGAAAACAACAGATGGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAAAGGGAACAATGCTAACTGAAGCAATCGCTCTGGACCTTATGTTTGTACTTCTCTTTGCAAGCTTTGAAACCACTTCACTGGCTCTTACTTATGCCATCAAACTACTCTCGGACAATCCCTTGGTGTTCAAGCAGTTACAAGAAGAGCATGAAGCCATCATCAAACGGCGTGAAAATCCTAACTCTGGAGTCACATGGCAAGAATACAAATCAATGAAATTTACATTTCAGCTCATAACTGAAACTGCGAGACTCGCAAATATAGCTCCAGGGATCTTCCGGAAGGCACTAAGGGAAATTAATTTTAAGGGACATACTATACCAGCAGGCTGGGCAATTATGGTGTGTCCCCCAGCTGTACATTTGAACCCCGCAAAATATCAGGATCCTCTTGCCTTCAACCCAAGTCGATGGGAGGGATTGGAACCGAATGGTGCTACCAAACATTTCATGGCTTTTGGTGGAGGCATGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTGAGATGGCTGTTTTTCTTCATTGTTTGGTAACAAAATATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCACATCCAGATCACAGAGAAAGATCAAAGAAAGCACGAACCAGAATATACAATTACAAATCAGAAGCCAAAACCCGCAAGGAAGACTTGTTAA 1395 0.4065 MWGLCLGALVILCIITHWVYRWRNPCCNGKLPPGSMGLPLLGETLQFFSPYTSSDIPPFINQRMKRYGPIFKTNLVGIPVVVSTDPDLNYFIFQQEGKKFQSWYPDTFTEIFGKQNVEVEQAACRTLQQSSCQDSVELKEATERMIFDLTAKKLISYDSTKSSENLRENFVAFIQGLVSFPLDIPGTAYHKCLQGRKRAMKMLKNMLQERREMPRKQQMDFFDYVIEELRKKGTMLTEAIALDLMFVLLFASFETTSLALTYAIKLLSDNPLVFKQLQEEHEAIIKRRENPNSGVTWQEYKSMKFTFQLITETARLANIAPGIFRKALREINFKGHTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPSRWEGLEPNGATKHFMAFGGGMRFCVGADFAKVEMAVFLHCLVTKYRWRPIKGGNIVRTPGLQFPNGFHIQITEKDQRKHEPEYTITNQKPKPARKTC 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00423 464 PRINTS P450 superfamily signature 308 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS P450 superfamily signature 391 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS P450 superfamily signature 382 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS P450 superfamily signature 251 268 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 Pfam Cytochrome P450 32 111 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 Pfam Cytochrome P450 168 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 SUPERFAMILY Cytochrome P450 23 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 CDD CYP90-like 63 440 - -
Trre10g00423 464 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 384 393 IPR017972 GO:0005506|GO:0016705
Trre10g00423 464 Gene3D Cytochrome P450 24 441 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PANTHER CYTOCHROME P450 26 30 415 - -
Trre10g00423 464 MobiDBLite consensus disorder prediction 441 464 - -
Trre10g00423 464 PRINTS E-class P450 group I signature 307 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS E-class P450 group I signature 391 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS E-class P450 group I signature 381 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS E-class P450 group I signature 347 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00423 464 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00423 Trre-Chr10 2823492 2826123 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00423 1 441 Cytochrome P450 AT1G12740 68.067 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00423 - - gmx:100812089 782.711