Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00422 ATGTGGGTTTTGTGGTTTGTAGCATTGGTTATTATATGCATTATTACACATTGGGTTTATAGATGGAGAAATCCATGTTGCAATGGTAAACTCCCACCTGGTTCTATGGGTTTGCCACTTTTAGGTGAGACCCTTCAGTTTTTTTCACCCTATACTTCTTCTGATATTCCTCCATTCATCAATCAGAGAATGAAAAGATATGGACCAATCTTCAAGACAAACTTGGTTGGGAGACCAGTTGTAGTCTCAACAGACCCTGATCTTAATTACTTCATATTCCAACAAGAAGGGAAAATATTTCAGAGCTGGTATCCAGATACATTCACAGAAATATTTGGGAAACAAAATGTAGGTTCCTTGCATGGTTTTATGTATAAGTACCTTAAAAACATGGTGCTCAATTTGTTTGGTCCTCAAAGCCTTCAAAAGATGATCTCAGAGGTAGAACAAGCAGCCTGCAGAACATTACAACAATCGTCGTGTCAGGATAGTGTTGAACTGAAGGAAGCAACAGCAAGGATGATATTTGATTTGACTGCAAAAAAACTCATCAGTTATGATTCAACCAAGTCCTCAGAGAATTTAAGGGAGAACTTTGTTGCATTTATACAAGGACTCATCTCATTCCCTTTGGACATTCCAGGAACAGCTTATCACAAATGTTTGCAGGGTAGGAAAAAGGCAATGAAAATGCTGAAGAACATGCTGCAGGAAAGAAGGGAAATGCCTAGAAAACAACAGACGGATTTCTTTGACTATGTTATTGAAGAACTTAGAAAAGAGGGAACAATGCTGACTGAAGCAATCGCTCTGGACCTCATGTTTGTGCTTCTCTTTGCAAGCTTTGAAACCACTTCTCTGGCTCTTACTTATGCCATCAAATTACTCTCTGACAATCCCTTGGTGTTCAAGCAATTACAAGAAGAACATGTAGCCATCATAAAACGGCGTGAAAATCCCAATTCCGGAGTCACATGGGAAGAATACAAATCAATGAAATTTACATTTCAGCTCATAACTGAAACTGCGAGACTCGCAAATATAGTTCCTGGGATCTTCCGGAAGGCGCTAAAGGAAATTAATTTTAAGGGACATACTATACCAGCAGGCTGGGCAATTATGGTGTGTCCCCCAGCTGTACATTTGAACCCCGCAAAATATCAGGATCCTCTTGCCTTCAACCCAAGTAGATGGGAGGGAATGGAACCGAATGGTGCTACCAAACATTTCATGGTTTTCGGTGGAGGCATGAGATTTTGTGTTGGGGCAGACTTCGCTAAGGTTCAGATGGCTGTTTTTCTTCATTGCTTGGTAACAAAATATAGGTGGCGACCCATCAAAGGAGGGAATATTGTTCGAACTCCTGGTTTACAATTTCCAAATGGCTTTCACATCCAGATCAGAGAGAAAGATCAAAGAAAGCAGGAACAAGAATATACAATTACAAATCAGAAGCCAAAACCCGCAAGGAAGACTTGTTAA 1482 0.4008 MWVLWFVALVIICIITHWVYRWRNPCCNGKLPPGSMGLPLLGETLQFFSPYTSSDIPPFINQRMKRYGPIFKTNLVGRPVVVSTDPDLNYFIFQQEGKIFQSWYPDTFTEIFGKQNVGSLHGFMYKYLKNMVLNLFGPQSLQKMISEVEQAACRTLQQSSCQDSVELKEATARMIFDLTAKKLISYDSTKSSENLRENFVAFIQGLISFPLDIPGTAYHKCLQGRKKAMKMLKNMLQERREMPRKQQTDFFDYVIEELRKEGTMLTEAIALDLMFVLLFASFETTSLALTYAIKLLSDNPLVFKQLQEEHVAIIKRRENPNSGVTWEEYKSMKFTFQLITETARLANIVPGIFRKALKEINFKGHTIPAGWAIMVCPPAVHLNPAKYQDPLAFNPSRWEGMEPNGATKHFMVFGGGMRFCVGADFAKVQMAVFLHCLVTKYRWRPIKGGNIVRTPGLQFPNGFHIQIREKDQRKQEQEYTITNQKPKPARKTC 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00422 493 PRINTS E-class P450 group I signature 420 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 289 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 336 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 376 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 269 286 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 410 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 Pfam Cytochrome P450 32 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 MobiDBLite consensus disorder prediction 470 493 - -
Trre10g00422 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 413 422 IPR017972 GO:0005506|GO:0016705
Trre10g00422 493 PANTHER CYTOCHROME P450 26 30 444 - -
Trre10g00422 493 SUPERFAMILY Cytochrome P450 28 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 Gene3D Cytochrome P450 24 470 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 FunFam Cytochrome P450 family protein 23 469 - -
Trre10g00422 493 CDD CYP90-like 63 467 - -
Trre10g00422 493 PRINTS P450 superfamily signature 280 297 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS P450 superfamily signature 411 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS P450 superfamily signature 337 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00422 493 PRINTS P450 superfamily signature 420 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00422 Trre-Chr10 2811473 2813979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00422 1 470 Cytochrome P450 AT1G12740 73.529 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00422 - - gmx:100812089 853.973