Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Trre10g00383 | ATGGAAAGAGAGGAAGATGTTAAGGTTGGAGCAAACAAATTCTCAGAAAAGAATGCATTAGGCACAGGAGTTCAAAGTGATAGTAAGGATTACAAGGAAGCACCACCAGCACCTTTGTTTGAGCCAGGAGAGTTGAAGTCATGGTCTTTTTATAGAGCTGGGATTGCTGAGTTTGTTGCAACTTTCTTGTTTCTTTACATAACTGTTTTAACTGTAATGGGTGTGAATAGATCACACTCTAAGTGTGCCTCTGTTGGTATTCAAGGAATTGCTTGGGCTTTTGGTGGTATGATCTTTGCACTTGTTTACTGCACTGCTGGAATTTCAGGTGGGCACATAAATCCAGCAGTGACATTTGGTTTGTTTTTGGCTAGGAAGTTGTCCCTGACAAGAGCAGTATTCTACATAATAATGCAGTGTCTTGGAGCTATCTGTGGTGCTGGTGTGGTGAAGGGTTTTGAGGGTAATGCTCGTTATGAGTTGTTCAAAGGTGGAGCAAATGTTGTGAATCCTGGTTACACCAAGGGTGATGGTCTTGGAGCTGAGATTGTTGGTACTTTTGTTCTTGTCTACACTGTCTTCTCTGCAACTGATGCCAAGAGAAATGCAAGGGACTCTCATGTTCCGATTTTGGCACCTCTTCCAATTGGGTTTGCTGTGTTTTTGGTTCACTTGGCTACTATTCCCATAACTGGAACTGGCATTAACCCAGCCAGGAGTCTTGGTGCTGCCATAATATACAACAAAGACCATGCTTGGGATGACCATTGGATTTTCTGGGTTGGACCTTTCATTGGAGCTGCTCTTGCTGCTTTATATCACCAGATAGTGATCCGAGCAATTCCTTTCAAGGCAAGGGGTTAA | 864 | 0.4306 | MEREEDVKVGANKFSEKNALGTGVQSDSKDYKEAPPAPLFEPGELKSWSFYRAGIAEFVATFLFLYITVLTVMGVNRSHSKCASVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFEGNARYELFKGGANVVNPGYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKARG | 287 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Trre10g00383 | 287 | Gene3D | Glycerol uptake facilitator protein. | 37 | 285 | IPR023271 | - | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 52 | 71 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 94 | 118 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 181 | 199 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 131 | 150 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 217 | 239 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PRINTS | Major intrinsic protein family signature | 257 | 277 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | SUPERFAMILY | Aquaporin-like | 44 | 279 | IPR023271 | - | |
Trre10g00383 | 287 | NCBIfam | MIP family channel protein | 56 | 274 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 12 | 282 | IPR034294 | - | |
Trre10g00383 | 287 | Pfam | Major intrinsic protein | 44 | 274 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | ProSitePatterns | MIP family signature. | 112 | 120 | IPR022357 | - | |
Trre10g00383 | 287 | CDD | MIP | 52 | 277 | IPR000425 | GO:0015267|GO:0016020|GO:0055085 | |
Trre10g00383 | 287 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
Trre10g00383 | 287 | FunFam | Probable aquaporin PIP1-2 | 37 | 287 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Trre10g00383 | Trre-Chr10 | 2496245 | 2497527 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Trre10g00383 | 3 | 286 | Major Intrinsic Protein MIP | AT4G23400 | 86.972 | 2.92e-174 | 481 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Trre10g00383 | K09872 | - | gmx:100796833 | 548.895 |