Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00350 ATGACTTCCAATACCACTTCTGGAAATGTTTGCTCGCCGCCGATGCAGTCCACATCTAATGGTGTATTTCAGGGAGATAACCCTCTTGATTATGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGATTGGCTTTTCTTCTAAAACCTTTAAGGCAACCGCGAGTTATTGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCGGCTCTAGGACGGAATAAAAGCTATCTGCATGCACGGCCCCCCCTAACTTTTAGAGCTAGCTCCGCCACTGCACCCAAGAGTCTTACAGTATTAGATACTCTAGCAAACCTTGGTCTTATATTCTTTCTATTTTTAGCCGGCATAGAGTTAGATCCTAAATCTCTGCGAAAAACTGGAGGTCGAGTCCTTGCAATTGCTATTGCCGGAATAAGCTTACCGTTTGCACTAGGAATTGGTTCATCATTTGTACTGCAAGCAACTATTGCTAAAGGTGTAAATACTTCTGCGTTTCTCGTATACATGGGAGTTGCTCTGTCTATAACTGCGTTTCCTGTATTAGCCCGTATTTTGGCCGAGTTAAAACTTCTAACCACTAGTGTCGGCAGAATGGCTATGTCGGCTGCAGCGGTTAATGATGTAGCAGCCTGGATTCTTCTTGCTCTAGCTGTTGCCTTATCAGGCAATAGCCAATCTCCATTTGTGTCATTGTGGGTTTTCCTAAGTGGGTTTGGTTTTGTCGTTTGTTCAATACTCACCGTTCTTCCAATTTTCAAATGGATGGCACAACAATGCCATGAAGGTGAGCCGGTCGATGAGTTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGGTTTGTCACTGATGCTATTGGAATTCATGCCATGTTTGGCGCGTTCGTTTTTGGAATTTTGGTTCCAAAAGATGGACCATTTGCGGGTGCTCTTGTGGAGAAAATAGAAGATCTTGTGTCTGGTCTATTACTCCCACTGTATTTTGTGTCAAGTGGATTGAAGACCGACGTAGCCACCATTCAGGGGCTGCAATCATGGGGTCTTCTAGTTTTTGTTACATTTACGGCTTGTTTTGGGAAGATCGTTGGGACTATTGTAGTTTCTCTTTTATGTAAAGTGCCTTTTAATGAGTCTTTAGTGCTTGGATTCTTGATGAATAGTAAAGGCTTGGTCGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTTGCCATCATGGTTCTCATGGCTCTCGTTACTACCTTCATGACCACTCCTCTTGTGCTGGCTGTGTATAAGAGGAAGGCAAGAAAATCTGATTACAAATACAGAACAATTGAAAGGAAAAACGCAGACAGCCAACTGAGGATTCTTGCCTGTTTCCACGGTGCAAGGAATATTCCGTCAATGATAAATTTGATCGAGACTTCAAGAGGAATCAAGAAGCATGACGCACTTCGTGTTTATGCAATGCACCTTAAAGAATTTTCCGAGAGGTCCTCATCAATACTATTGGCACAAAAGGTTAGAGAAAACGGGTTGCCGTTTTGGAATAATGGTTGCCATGGAGATTCTGTCCATGTTACTGTGGCGTTTGAGGCTTACCATAAACTAAGCCAAGTTTGTATCCGGCCAATGATAGCAATCTCCTCAATAGCTAACATTCACGAAGACATATGTGCAACTGCTGAAAGAAAGAGAGCTGCAATCATCATTCTCCCATTTCATAAGCAACAAAGATTAGACGGTTCAGTAGACATTATAAGAAATGATTTTCGATATGTAAACAAAAGGGTACTTGAGCATGCACCATGCTCAGTTGGAATTTTTGTTGATCGCGGGCTTGGTGGTACATGTCATGTGCCTGCAAGTAATGTTTCCTTTTGCATTTCCGTGTTTTTCTTTGGCGGTGGTGACGACCGTGAAGCTCTTGCATATGCAGCTCGTATGGCCGAGCACCCTGGAATACAGTTAGTGGTTACTCGCTTCTTAGTGGAACCTAATATTGCAGGTGAGATTACTAGAGTTGACATCGAAGACTCTTCTAGCAGTAATTCAATCTCAGAGGATGAGGAGTTCCTCGCACAATTTAAGCTGAAAGCAGAAAGTGACGACTCCATTGTTTATGAAGAAAAAATAGTAAAAGATGCTGCAGAAACAGTTGCTACTATACGCAAGTTTAATTCCTGCAATCTGTTTCTTGTGGGTATAAGGCCATCCGGTGAATTGGCCTGTGCTTTGGAAAGAAGCGAGTTCCCGGAACTAGGACCTATTGGGGGCTTGTTGGCATCCCAAGATTGCCCCACAACAGCGTCCGTTTTGGTGATGCAACAGTATCCAAATAGAGTACCAATAAATTTTGGCTCAGAAATGGAGGAACAGTCACCTGATGTAGACACAGAATCTTCTTAA 2436 0.4282 MTSNTTSGNVCSPPMQSTSNGVFQGDNPLDYALPLAILQICLVLVVTRGLAFLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHARPPLTFRASSATAPKSLTVLDTLANLGLIFFLFLAGIELDPKSLRKTGGRVLAIAIAGISLPFALGIGSSFVLQATIAKGVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNSQSPFVSLWVFLSGFGFVVCSILTVLPIFKWMAQQCHEGEPVDELYICATLAAVLAAGFVTDAIGIHAMFGAFVFGILVPKDGPFAGALVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGLQSWGLLVFVTFTACFGKIVGTIVVSLLCKVPFNESLVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALVTTFMTTPLVLAVYKRKARKSDYKYRTIERKNADSQLRILACFHGARNIPSMINLIETSRGIKKHDALRVYAMHLKEFSERSSSILLAQKVRENGLPFWNNGCHGDSVHVTVAFEAYHKLSQVCIRPMIAISSIANIHEDICATAERKRAAIIILPFHKQQRLDGSVDIIRNDFRYVNKRVLEHAPCSVGIFVDRGLGGTCHVPASNVSFCISVFFFGGGDDREALAYAARMAEHPGIQLVVTRFLVEPNIAGEITRVDIEDSSSSNSISEDEEFLAQFKLKAESDDSIVYEEKIVKDAAETVATIRKFNSCNLFLVGIRPSGELACALERSEFPELGPIGGLLASQDCPTTASVLVMQQYPNRVPINFGSEMEEQSPDVDTESS 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00350 811 FunFam Cation/H(+) antiporter 15 35 447 - -
Trre10g00350 811 PANTHER CATION/H + ANTIPORTER 10 787 - -
Trre10g00350 811 Gene3D - 35 449 IPR038770 -
Trre10g00350 811 Pfam Sodium/hydrogen exchanger family 42 436 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00350 Trre-Chr10 2263447 2266899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00350 5 787 Antiporter Super Family AT5G41610 65.574 0.0 1019
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00350 K26731 - gmx:100810155 1213.75