Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00349 ATGACTTCGAATACTACATCTGGAAATGTTTGCCCGCCGCCAATGAAGCCTGCATCTAATGGTGTATTTCAGGGAGATCACCCTCTTGATTATGCACTTCCCTTGGCTATTTTGCAGATATGCCTTGTTCTTGTAGTCACAAGGGGACTGGCTTATCTTCTAAAACCTTTAAGGCAACCACGAGTTATCGCAGAGATTGTTGGAGGAATACTACTTGGGCCATCAGCACTTGGACGGAATAAAAGCTATCTACATGCAGTTTTCCCACCCAAGAGTCTTCCAGTATTAGATACTCTAGCAAACCTTGGCCTTATATTCTTTCTATTTTTAGCAGGCATAGAGTTAGATCCCAAATCTCTTCGACAAACTGGAGGCCGAGTCCTTGCAATTGCCATGGTCGGAATAAGCCTACCCTTTGCACTAGGGATTGGTTCATCATTTGTTCTGAAAGAAACAATTGCGAAAGATGTAAATACTTCAGCATTTCTCGTATACATGGGAGTTGCTCTGTCTATAACTGCATTTCCTGTATTAGCCCGTATTTTGGCTGAGTTAAAACTTTTAACGACCAGTGTTGGACGGATGGCTATGTCGGCTGCAGCAGTTAATGATGTAGCTGCCTGGATTCTTCTTGCCTTGGCTGTTGCCTTATCAGGAAATACCCAATCTCCACTTGTGTCATTGTGGGTCTTCTTATGTGGTATTGGTTTTGTCGTTTGTTCGATCCTCATCGTCCTTCCAATTTTCAAATGGATGGCCCAACAATGCCATGAAGGTGAACCAGTCGATGAGTTGTACATATGTTCTACATTAGCTGCTGTTCTGGCTGCTGGATTTGTCACAGATGCTATTGGAATTCATGCCATGTTTGGTGCATTTGTTTTTGGAATTTTGATTCCAAAAGATGGACCATTTTCCGGCGTTCTTGTGGAGAAAATAGAGGATCTTGTGTCTGGTTTATTGCTCCCGCTCTATTTTGTGTCAAGTGGATTGAAGACTGATGTAGCCACCATTCAGGGGATGCAGTCATGGGGTCTTCTAGTTTTCGTTACATTTACTGCTTGTTTTGGGAAGATTGTTGGGACTATTGTAGTGTCTCTTTTATGTAAAGTGTCTTTTAACGAGTCTGTAGTGCTTGGATTCTTGATGAATAGTAAAGGCTTGGTTGAATTAATTGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAAACCTTTGCCATTATGGTTCTCATGGCTCTCATTACTACCTTCATGACCACTCCTCTTGTGATGGCCGTGTATAAGAGGAAAGCAAGAATATCGGATTACAAATACAAAACAATTGAAAGGAAAATTGCAGACAGCCAATTGAGGATTCTTGTCTGCTTCCATGGTGCAAGGAATATTCCATCAGTGATAAATTTGATTGAGACTTCAAGAGGAATCAAGAAGCGTGACACACTTTGTGTATATGCAATGCACCTTAAAGAATTTTCTGAGAGGTCCTCATCAATACTAATGGTACAAAAGGTAAGAAAAAATGGATTGCCATTTTGGAATAAAGGTCACCGCTCAGATTCTGACCATGTTATTGTGGCATTTGAGGCTTACCAAAAACTAAGCCAAGTTTGTGTCCGGCCAATGATAGCAATCTCTGCGATAGCTAACATTCATGAAGACATATGTGCAACTGCTGAAAGAAAGAGAGCCGCAATCATCATTCTCCCATTTCATAAGCAACAAAGATTAGATGGTTCACTTGACATTACAAGAAATGATTTTCGATTGGTTAACAAAAGGGTACTCGAGCATGCACCATGCTCAGGTGGAATTTTTGTTGATCGCGGGCTTGGTGGTACATGTCATGTGTCTGCAAGTAATGTTTCTTATTGTGTTTCTGTGCTTTTCTTTGGCGGCGGTGATGATCGTGAAGCTCTTGCTTATGGAGCTCGTATGGCTGAGCACCCTGGCATAAGATTAGTGGTCATTCGTTTCTTAGTGGAAACTAATATTTTAGGGGAGATTACCAGAGTTGACGTTGGAGAATCATCTAGCGGTAAATCAATTTCAGAGGATGAGGAGTTCCTTGCGGAATTTAAGATGAAAACAGCCAGTGATGAATCCGTTATCTATGAAGAGAAAATAGTAAAAGATGCTGCAGAAACAGTTGCTTCTATCCGAGAGTTTAATTCTTGCAATCTGTTTCTTGTGGGTCTAAGGCCAACAGGTGAATTAGCCTGTGCTCTGGAAAGAAGCGACTGCCTGGAACTAGGACCTGTTGGTGGCTTGTTAGCATCCAACGATTTCCCCACAACAGCATCAGTTTTGGTGATGCAACAGTATCACAATGGGGTGCCGACAAATTTAGGCCCAGTAATAGAGGAACATTCACACGATGGAGACACAGAATCTGCCTAA 2406 0.4169 MTSNTTSGNVCPPPMKPASNGVFQGDHPLDYALPLAILQICLVLVVTRGLAYLLKPLRQPRVIAEIVGGILLGPSALGRNKSYLHAVFPPKSLPVLDTLANLGLIFFLFLAGIELDPKSLRQTGGRVLAIAMVGISLPFALGIGSSFVLKETIAKDVNTSAFLVYMGVALSITAFPVLARILAELKLLTTSVGRMAMSAAAVNDVAAWILLALAVALSGNTQSPLVSLWVFLCGIGFVVCSILIVLPIFKWMAQQCHEGEPVDELYICSTLAAVLAAGFVTDAIGIHAMFGAFVFGILIPKDGPFSGVLVEKIEDLVSGLLLPLYFVSSGLKTDVATIQGMQSWGLLVFVTFTACFGKIVGTIVVSLLCKVSFNESVVLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMALITTFMTTPLVMAVYKRKARISDYKYKTIERKIADSQLRILVCFHGARNIPSVINLIETSRGIKKRDTLCVYAMHLKEFSERSSSILMVQKVRKNGLPFWNKGHRSDSDHVIVAFEAYQKLSQVCVRPMIAISAIANIHEDICATAERKRAAIIILPFHKQQRLDGSLDITRNDFRLVNKRVLEHAPCSGGIFVDRGLGGTCHVSASNVSYCVSVLFFGGGDDREALAYGARMAEHPGIRLVVIRFLVETNILGEITRVDVGESSSGKSISEDEEFLAEFKMKTASDESVIYEEKIVKDAAETVASIREFNSCNLFLVGLRPTGELACALERSDCLELGPVGGLLASNDFPTTASVLVMQQYHNGVPTNLGPVIEEHSHDGDTESA 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00349 801 Gene3D - 35 438 IPR038770 -
Trre10g00349 801 PANTHER CATION/H + ANTIPORTER 10 778 - -
Trre10g00349 801 FunFam Cation/H(+) antiporter 15 35 437 - -
Trre10g00349 801 Pfam Sodium/hydrogen exchanger family 42 426 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00349 Trre-Chr10 2257531 2260656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00349 5 799 Antiporter Super Family AT5G41610 66.708 0.0 1045
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00349 K26731 - gmx:100810155 1241.48