Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00345 ATGAACGACACAGATGTCTCCAAGCAAATCCAGCAGATGGTCAGATTCATCCGCCAAGAAGCCGAAGAGAAAGCCAACGAGATCTCTGTTTCCGCCGAAGAAGAATTCAACATTGAGAAGCTGCAATTGGTTGAAGCTGATAAGAAGAAGATCCGTCAAGAGTATGAACGCAAGGAGAAGCAAGTTGATGTTAGGAAGAAGATTGAGTACTCTATGCAGTTGAATGCTTCACGGTTAAAAGTTCTGCAAGCTCAAGATGACGTGGTTAATAAAATGAAAGAGGCTGCAGCCACGGAACTTTTGAGTGTGAGTCGTGATCATCGTGTGTACAAAAACCTTCTAAAAGATCTCGTTATTCAGAGTTTGCTGAGGCTGAAAGAACCTTCTGTCCTATTGAGGTGTCGGAAAGAGGACCTGCAATTGGTAGAGGATGTGTTGGATTCAGCTGCTCAGGAGTATGCTGAAAAGGCAAATCTTCATGTACCCGAGATTGTTGTTGATAAGGATGTCTTTCTTCCACCTGCTCCCAGCCATCACAATCCCCATGATCTCCACTGCTCTGGAGGTGTGGTATTGGCTTCTCATGATGGAAAGATTGTGTTTGAAAATACACTTGATGCGCGTTTGGATGTAGTGTTCCGGAACAAACTCCCAGAGATCCGCAGGCAGCTCTTTGGACAAGTTGCTGTTTGA 693 0.4473 MNDTDVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEYERKEKQVDVRKKIEYSMQLNASRLKVLQAQDDVVNKMKEAAATELLSVSRDHRVYKNLLKDLVIQSLLRLKEPSVLLRCRKEDLQLVEDVLDSAAQEYAEKANLHVPEIVVDKDVFLPPAPSHHNPHDLHCSGGVVLASHDGKIVFENTLDARLDVVFRNKLPEIRRQLFGQVAV 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00345 230 Gene3D - 92 229 IPR038495 -
Trre10g00345 230 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Trre10g00345 230 Coils Coil 41 61 - -
Trre10g00345 230 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre10g00345 230 Gene3D - 1 62 - -
Trre10g00345 230 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 227 IPR002842 GO:0033178|GO:0046961|GO:1902600
Trre10g00345 230 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00345 Trre-Chr10 2229252 2232790 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00345 1 229 Primary Pumps ATPases(2) AT4G11150 77.729 3.12e-129 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00345 K02150 - qsu:112031179 383.645