Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00336 ATGGAACAATTCCGGCATATTGGTGAGGTTCTTGGAAGCCTAAAAGCGCTTATGGTTTTGCGCGATGAAATTCAAATCAATCAACGTCAATGTTGTTTGATCCATGACATATTCACCCTAGCATTCGACACAATCTCAGACGAGATAAGGCAGAATCTAAAGCTTGATGAAAGAGCTACCAAATGGAAACCTCTTGAATTTCCCCTCAGAGAGCTTTGCAGGGTTTTCAAAGAAGGTGAACTATACATCAAGCATTGTTTGGATTCAAAAGATTGGTGGGGGAAATCACTAACACTTTCTCAAAACCGAGACTGCGTCGAGTTTCACATCCATAACTTGCTTTGTTATTTCCCTGCGGTTATTGAAGCGATCGAGAGTGCTGGTGAGATGTCGGGTTTGGATCAAGATGAGAATTCAAAGAAGAAAGTTATGCTTGCAAGAAAATATGATGTGGAATGGAATGATCCAAAACTTTTTCAATGGAGATTTGGGAAACAATATTTGGTTCCAAAAGAGATTTGCAACCAATTGGAGAATGCTTGGAGAGAAGATAGATGGAGGCTCATAGAATCACTCAAAGAGAAAAAAAGTTCTTCCAAACTCACTTGTTCAAAGAATGAGCAATATTTTGCTGATATGTTGTTGAAGAAACTATTGAATGGTTCAGAAAAAACCAATAATAGTAACCATAATAAGATTCTGTGGCCAATTGGGATTTTGTTAGGATCCAAAGATTACCAAGTGAGGAGAAGATTGGGAAGGGGAAAGCAATTTAAGGAAATTCAATGGCTAGGACAAAGTTTTGCTTTGAGGCATTTTGTTGGGGAAAGAGAAGCTTATGAAAATGAGATTTTCAATTTGTTATCACTTTCTCATCCTAACATATTGCAATATCTATGTGGTTTTTATGATGAAGATAAGAAAGAGTTTTCACTTGTGATGGAGTTAATGAGCAAGGATTTATGCACATACATGAAAGAGAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTTGTGGTTGATCTCATGCTTCAAATGGCAAGAGGCATTGAATATCTTCACACCAAAAAAATTTACCATGGAAACCTTAATCCTTGTAATATCCTACTAAGAGCAAGAAACTCACAAGAAGGTTATTTTCAAGCCAAAGTTGTAGGATTTGGTTTGTCATCTGTGACGAATGGTGAAAACAATACTACTAGAACCTCACCGACACATAACCCTATTGCTGAAGAGATTAACCCTTCAGTTTGGTATGCACCTGAGGTTTTAACTGAGCTAGAACAAATGAAAAATGTTTTGACTTCTTGCAAGTACTCGGAGAAAGCCGATGCATATAGTTTCGGTATGATATGTTTTGAGTTGTTGACAGGAAAAGTTCCTTTTGAGGATAACCATCTTCAAGGAGATAGGACTAGCCAAAATATCAAAGCAGGAGAAAGACCTTTGTTTCCATATCATTCACCGAAATATCTTGTGAGTTTGATAAAAAAATGTTGGCAAACTGATCCATCTCAGCGTCCTACTTTCTCGTCTATTTGTAGGATTTTGCGCTACACCAAAAAGTTTCTTTCAATGAACAGTGAATATGTTATGATCAATCCTGAACTCAATCAGGTTGAACTTCAAAACCCACCTGTAGATTGTTGTGACCTTGAAGGAATGTTCTTTAAAAGTTTTCCAATGGAAAGGACAAGTAACATGTCTTGTGTTTCACAAATACCTTATGAAATGTTTGCTTACAAAGTTGTTGAGAAAGGGAAGATCAATAATCAGAATCAGAGTAATACTCCTACTAAAGATAAGTGCTGTGAGTGTGAGCCAATAAAGGATGAGGTTATTGTACATGGGGAAGAAACTGAACAAAGCACAGTTTGTAGAGATGCTAATGCATCCATCATGGAAGAACTAGTAACGTATCCCAAATCAATTTTTGGTGACACGCAGTCTAGTTCTTCTGATTCGCCACCAAGGAAGAGTGTTACAATAAAGACACCATTACCAATGAAGCCAAAGAAAGACCAAGGAACTCGAAAATTGCAAGTAACAAGATCATTACCACCATCATTATCTGGTCGCATTTCAAGGACAAATAAGGTGAATTTGTCATCAATGACATCTAGCCCTCTAAGCCCAGGTAAAAGAAGCACTGCCAATGTCTCGTCAGAATCGGAGCGCAATAACAATATTAACAAAGGGAATCAGTCACCATTAGTGTCAACTTCAAGCTCAGCTAGAAGAAAATTATATGATGGAGGCAATGTATCAGATTCCAAGTCTAGTTTAAAGGTGAAAACAAGAGACCAATCACCATTTAACAGTGTAAAGACAAGGAAACCACAACTTCCTTTGAATCCTTCTTCGAGTCCGATAAGAATGAGACGTGTCAAAAGTACTAATAACACCTCAAGTGTGAGGATGCAAAAAGGGTTCATTTCAACACCTCCAATGAGTCCTTCAAGGACATTCATAAGCAAAAAAGGCGGTAATGTTTCAGATATGGATACTGTTTTGAAGATACGAGGTAGATTGTCATCATATGGATTGAGTCCCTTGAGTCCATATGTGAGCAATCATAAGACTAAAAGAGAAAGCATGTCACCATTTACAATGTCTCCTTTGAGTCCGTATGTAAGAGCAACAACATGTGGTCATGTCTCGGATTAA 2676 0.3767 MEQFRHIGEVLGSLKALMVLRDEIQINQRQCCLIHDIFTLAFDTISDEIRQNLKLDERATKWKPLEFPLRELCRVFKEGELYIKHCLDSKDWWGKSLTLSQNRDCVEFHIHNLLCYFPAVIEAIESAGEMSGLDQDENSKKKVMLARKYDVEWNDPKLFQWRFGKQYLVPKEICNQLENAWREDRWRLIESLKEKKSSSKLTCSKNEQYFADMLLKKLLNGSEKTNNSNHNKILWPIGILLGSKDYQVRRRLGRGKQFKEIQWLGQSFALRHFVGEREAYENEIFNLLSLSHPNILQYLCGFYDEDKKEFSLVMELMSKDLCTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHTKKIYHGNLNPCNILLRARNSQEGYFQAKVVGFGLSSVTNGENNTTRTSPTHNPIAEEINPSVWYAPEVLTELEQMKNVLTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTSQNIKAGERPLFPYHSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSMNSEYVMINPELNQVELQNPPVDCCDLEGMFFKSFPMERTSNMSCVSQIPYEMFAYKVVEKGKINNQNQSNTPTKDKCCECEPIKDEVIVHGEETEQSTVCRDANASIMEELVTYPKSIFGDTQSSSSDSPPRKSVTIKTPLPMKPKKDQGTRKLQVTRSLPPSLSGRISRTNKVNLSSMTSSPLSPGKRSTANVSSESERNNNINKGNQSPLVSTSSSARRKLYDGGNVSDSKSSLKVKTRDQSPFNSVKTRKPQLPLNPSSSPIRMRRVKSTNNTSSVRMQKGFISTPPMSPSRTFISKKGGNVSDMDTVLKIRGRLSSYGLSPLSPYVSNHKTKRESMSPFTMSPLSPYVRATTCGHVSD 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00336 891 SUPERFAMILY Protein kinase-like (PK-like) 244 544 IPR011009 -
Trre10g00336 891 Pfam Protein tyrosine and serine/threonine kinase 277 519 IPR001245 GO:0004672|GO:0006468
Trre10g00336 891 MobiDBLite consensus disorder prediction 647 663 - -
Trre10g00336 891 Pfam Protein of unknown function (DUF1221) 21 243 IPR010632 -
Trre10g00336 891 FunFam Kinase family protein 243 533 - -
Trre10g00336 891 MobiDBLite consensus disorder prediction 683 805 - -
Trre10g00336 891 Gene3D Transferase(Phosphotransferase) domain 1 241 545 - -
Trre10g00336 891 ProSiteProfiles Protein kinase domain profile. 246 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trre10g00336 891 MobiDBLite consensus disorder prediction 854 877 - -
Trre10g00336 891 MobiDBLite consensus disorder prediction 647 805 - -
Trre10g00336 891 PANTHER SERINE-THREONINE PROTEIN KINASE 270 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00336 Trre-Chr10 2173458 2176644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00336 245 536 MAP Kinase Kinase Kinase AT1G14000 30.293 1.83e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Trre10g00336 PK_Tyr_Ser-Thr 5.4e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00336 - - psat:127120797 1400.96