Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00307 ATGACCATAGCAGAGAAGAGTGATGTATACAGTCATGGAGTGGTTTTGCTAGAGATACTAAGCAGAAGAAGTGCCGTTGAATCTCAACATGTTGGAGATGGACAACACATAGTTGAAGGGGTGAAGAAAATGGCAAGTTTTGAACCAGCTGTACTGGATACAAAGCTTCAAAGTCTACCAGATCAAATGGTGCAAGAGATGCTTCAAACACTTGGAATTGCTATGTTTTGGGTGAATTCTTCGCTGGTTGAACGTCCAACTATGAAGGAAGTTGTTAACTACATATGGAAGTGA 294 0.4082 MTIAEKSDVYSHGVVLLEILSRRSAVESQHVGDGQHIVEGVKKMASFEPAVLDTKLQSLPDQMVQEMLQTLGIAMFWVNSSLVERPTMKEVVNYIWK 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00307 97 SUPERFAMILY Protein kinase-like (PK-like) 5 95 IPR011009 -
Trre10g00307 97 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 93 - -
Trre10g00307 97 Gene3D Transferase(Phosphotransferase) domain 1 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00307 Trre-Chr10 1963726 1964019 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00307 1 95 Receptor kinase-like Gene Family AT5G65700 42.424 7.40e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trre10g00307 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00307 - - tpra:123903867 150.984