Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00290 ATGGTTGCCGCCACCGCTATCTCAACCGTCGTCACCGATGCCAATCTTCACACCAGATTTCATTCCTCTTTTTCTTCTTCTATCTCGTCATTCACTCTCCCACTCTCTCCTCACTTTTCTTCTCACCCCAAACACTTTTCTTCTATCAGATGCCAATCGGTTAATACTGATAAGAAGAAAAGTAGCAGAAATGTGTTTGACAATGCCAGCAACCTCTTAACCAGCTTATTAAGTGGTGGAAGTTTAGGTTCTATGCCTATAGCTGAAGGTGCTGTCACGGACCTCTTTGATCGACCGTTGTTTTTCTCACTATATGATTGGTTCATAGAGCATGGCTCTGTGTATAAACTAGCATTTGGGCCGAAAGCATTTGTTGTTGTATCAGATCCCATTGTTGCAAGACATATTCTGCGAGAAAATGCCTTTTCTTATGACAAGGGAGTACTCGCTGATATCCTAGAGCCAATTATGGGAAAAGGACTAATACCTGCAGACCTTGAGACATGGAAGCAAAGGAGAAGAGTGATTGCTCCGGGTTTCCATACCTCATACTTGGAAGCTATGGTAAAACTATTCACTTCCTGTTCAGAAAGAACAGTATTGAAGTTCAATGAGCTTCTTGAAGGAGAGGGGCATGATGGACAGAAGTCAATTGAATTGGACCTTGAGGCAGAATTTTCAAATTTGGCTCTTGATATTATTGGGCTAGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAATGAATCTCCCGTTATTAAGGCTGTCTATGGCACTCTTTTTGAAGCTGAACATAGATCCACTTTCTATATTCCATATTGGAAACTTCCATTAGCAAGTTGGATAGTACCTAGACAAAGGAAGTTTCAGGAAGACCTTAAGGTCATTAATACTTGTCTTGACGGACTTATCAGAAATGCAAAAGAGAGCAGGGAGGAAACAGATGTTGAGAAACTGCAGCAAAGGGATTACTCAAATTTGAAGGATGCAAGTCTACTGCGTTTCCTAGTTGATATGCGGGGAGTTGATGTTGATGATCGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAGACGACGGCTGCAGTTCTTACATGGGCAGTTTTCCTGCTAGCTCAAAATCCTGACAAAATGAAGAAGGCTCAAGCAGAGGTAGATTCGGTGCTGGGTACAGGGAAGCCAACTTTTGAATCGCTTAAAAAGTTGCAGTACATCAGGTTAATTGTTGTGGAGGCTCTTCGATTATATCCACAACCACCTCTGCTGATTAGACGTTCACTCAAATCTGATGTTTTACCAGGGGGTTATAAAGGTGACAAAGATGGTTATACAATTCCTGCTGGGACTGATGTCTTCATTTCTGTATATAATCTCCACCGATCTCCATATTTTTGGGACCGTCCTAATGACTTCGAGCCTGAGAGATTTCTAGTGGAAAACAAGAATGAAGAAATCGAAGGGTGGGCTGGTTTTGACCCATCTCGAAGTCCTGGAGCCTTGTATCCAAACGAGGTTATATCGGATTTTGCCTTCTTGCCTTTTGGTGGTGGACCTCGAAAATGTGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCACTGACTATGCTACTACAGAATTTCGACGTGGAATTGAAGGGGACCCCTGAATCGGTCGAACTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTTCTGTACAATGA 1749 0.426 MVAATAISTVVTDANLHTRFHSSFSSSISSFTLPLSPHFSSHPKHFSSIRCQSVNTDKKKSSRNVFDNASNLLTSLLSGGSLGSMPIAEGAVTDLFDRPLFFSLYDWFIEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGVLADILEPIMGKGLIPADLETWKQRRRVIAPGFHTSYLEAMVKLFTSCSERTVLKFNELLEGEGHDGQKSIELDLEAEFSNLALDIIGLGVFNYDFGSVTNESPVIKAVYGTLFEAEHRSTFYIPYWKLPLASWIVPRQRKFQEDLKVINTCLDGLIRNAKESREETDVEKLQQRDYSNLKDASLLRFLVDMRGVDVDDRQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPDKMKKAQAEVDSVLGTGKPTFESLKKLQYIRLIVVEALRLYPQPPLLIRRSLKSDVLPGGYKGDKDGYTIPAGTDVFISVYNLHRSPYFWDRPNDFEPERFLVENKNEEIEGWAGFDPSRSPGALYPNEVISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCNLRKRSSVQ 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00290 582 Pfam Cytochrome P450 108 572 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS E-class P450 group I signature 348 365 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS E-class P450 group I signature 515 525 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS E-class P450 group I signature 525 548 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS E-class P450 group I signature 108 127 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS P450 superfamily signature 516 525 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS P450 superfamily signature 525 536 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS P450 superfamily signature 411 422 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 PRINTS P450 superfamily signature 359 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 518 527 IPR017972 GO:0005506|GO:0016705
Trre10g00290 582 SUPERFAMILY Cytochrome P450 95 578 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00290 582 CDD CYP97 102 572 - -
Trre10g00290 582 PANTHER CYTOCHROME P450 FAMILY 4 111 578 - -
Trre10g00290 582 Gene3D Cytochrome P450 84 582 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00290 Trre-Chr10 1877339 1883509 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00290 48 579 Cytochrome P450 AT4G15110 78.236 0.0 897
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00290 K24543 - gmx:606504 999.579