Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00197 ATGGCAACAATACCATTTATGGATATCATAAGTTATGTACTTATATTCTTAGTAATATTTATTGTTACACAAGTTTTTTATTCACTACTTGCAGCCATAACAAGAAACAAAACACTCCCACCAGGACCATTCCCTCTTCCCATAATTGGAAACCTCTTTGTAATGGACAACAAACCACATAAAGCCTTAGCCAAACTTGCCAAAATTTATGGTCCAATACTTAGTTTAAAGCTAGGCCAAGTAACAACCATAGTTGTCTCTTCGGCCGACATGGCCAAAGAGATACTCCAAACTCATGATTCGTTACTTTCAGACCGAACTGTACCGCATGCTTTAACTGCTTTCAACCACGACCAATTTGGCGTGGGATTCCTCCCTCTTTCGCCTCTTTGGCGAGAGATGAGAAGGGTATGCAAAAACCAATTATTCTCTAACAAGAGTCTTGATGCGAATCAATATCTTAGGCGAAATAAGATAGATGAACTCATCAATTATGTTTCTCAATGTAGTCTAAAGGGTGAAGCAATAGATATTGGAAGTGTAGCTTTTAAGACTTCAATTAATTTGCTATCAAATACTATTTTTTCTGTAGACTTTGCTAATATCTCTGCAGGTACTAATGACAATAAAGAAAACAAAGATTTAGTTATTAATATGGCGAAGACAGTTGGAGTGCCAAACATGTCTGATTTTTTCCCATTGTTGAGGTTGATTGATCCACAAGGCATAAAAAAGACTTATCTATTTTATATTGGAAAGTTGTTCAGTGTTTTCGACAACATAATCGACCAAAGGTTGAAGTTGCGAGATGCGGATGATTTTGTCACCGATAATGACATGCTAGACTCCTTGATCAATCTTTTAGAAGAAAACCCAAAGGAGATGGACAGAGAAAAAATGGAACATTTAGTACATGATCTAATTCTAGAAAATGGTATGAAACCTGAAGAAATTGACATGGAAGGTGCAATAGATGGACTTGCCTTGAAAAAATGTGAATCCTTGAGAGTTATTCCAACCAAAATAAGTAATTAA 1035 0.3585 MATIPFMDIISYVLIFLVIFIVTQVFYSLLAAITRNKTLPPGPFPLPIIGNLFVMDNKPHKALAKLAKIYGPILSLKLGQVTTIVVSSADMAKEILQTHDSLLSDRTVPHALTAFNHDQFGVGFLPLSPLWREMRRVCKNQLFSNKSLDANQYLRRNKIDELINYVSQCSLKGEAIDIGSVAFKTSINLLSNTIFSVDFANISAGTNDNKENKDLVINMAKTVGVPNMSDFFPLLRLIDPQGIKKTYLFYIGKLFSVFDNIIDQRLKLRDADDFVTDNDMLDSLINLLEENPKEMDREKMEHLVHDLILENGMKPEEIDMEGAIDGLALKKCESLRVIPTKISN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00197 344 Gene3D Cytochrome P450 32 311 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00197 344 Pfam Cytochrome P450 40 309 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trre10g00197 344 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 308 - -
Trre10g00197 344 SUPERFAMILY Cytochrome P450 35 309 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00197 Trre-Chr10 1276516 1278372 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00197 7 309 Cytochrome P450 AT3G61040 37.908 5.57e-65 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00197 - - cave:132173603 308.145