Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00193 ATGGTAAACCCGAAAGGGTCTAGTCAATCAAAGATATGTTACAGGCCTATACGACCTTCTGATTTTGACGTTTTAGAGCGTATTCATGGAAGATTATTTCCTATCAGGTATGAATCTACTTTTTTCCAAGATGTGGTAAACGGACGTGATATTGTGTCGTGGGGAGCAGTTGATCTTAGTCGACCAAATGGCCAAAGTGATGAACTCATTGGATTTGTAACAGCGCGGATTGTTCTTGCAAAAGAAAGTGAGATAGTGGATTTGCTTGGATATGACTCAGCCAAATCTGATCAGACTTTAGTGTACGTTCTAACACTGGGAGTAGTGGAAGCATATAGGAGCCTCGGAATAGCTTCTTCTCTGATACGGGAGGTCATAAAATATGCTTCAAGTATTTCAACATGCAGAGCAGTTTACTTGCATGTAATTTCTTTCAATATCTCGGCAATCAATTTATACAAGAAAATGTCTTTCAAGTGTGTTAGAAGACTGCAGGGATTTTATTTTATCAATGGCCAACATTATGATTCATTTTTATTCGTTCACTACGTAAATGGGGGACGGTCTCCTTGCTCACCATTAGAGCTTTTGTCTGCAATCGTAAGCTTTATGAAGAGTGGCTTTAAGGCGGTGGCTGCAAAGCTGTGCAAGAACGAAGTAAGGAAGATCTCAAGGTGGGAAAAATGTAAAGAAAGTCATTCTCTTGTCTCACTCTCAACAATACCCAACAAAAGAAATGTGGCGGTCGAGTGTAATGGTAGTGAGTTTGTGTAA 774 0.3979 MVNPKGSSQSKICYRPIRPSDFDVLERIHGRLFPIRYESTFFQDVVNGRDIVSWGAVDLSRPNGQSDELIGFVTARIVLAKESEIVDLLGYDSAKSDQTLVYVLTLGVVEAYRSLGIASSLIREVIKYASSISTCRAVYLHVISFNISAINLYKKMSFKCVRRLQGFYFINGQHYDSFLFVHYVNGGRSPCSPLELLSAIVSFMKSGFKAVAAKLCKNEVRKISRWEKCKESHSLVSLSTIPNKRNVAVECNGSEFV 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00193 257 CDD NAT_SF 77 141 - -
Trre10g00193 257 FunFam Histone acetyltransferase MCC1 isoform A 6 187 - -
Trre10g00193 257 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 4 243 IPR045141 GO:0004596
Trre10g00193 257 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016747
Trre10g00193 257 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 181 IPR016181 -
Trre10g00193 257 Pfam Acetyltransferase (GNAT) family 66 158 IPR000182 GO:0016747
Trre10g00193 257 Gene3D - 4 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00193 Trre-Chr10 1240742 1243583 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00193 Acetyltransf_1 1.5e-10 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00193 K22767 - gmx:100812509 434.876