Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00123 ATGAATAATAACTCGGAAAAGAAACTCGAGTGCTTGATGGAGGAAACATGTATTTCTTCCAAGGAAAATAGCATTGATTTAACCCAAATCAGACTTCGACCCTTTAATCTTTCAGACCTTGATGATCTCATGGTATGGAAAACTGATGAAAAAGTGGACAAGTTCTCCTTTGGTGAACCTTACACTAGCAAAGAACAGGGCATCAACTTCATTGAAAATATAGCACCAAAGTTTCAATTGTGCAAAGCAATATGTCTCAATGATCGTGCTATTGGTAGTATTTTGATCTACCCGAGTTATGATAAAAGTAGGAACAATTCTGCAGAACTTGGCTATGTTCTTGGTTCTAAATATTGGGGTAAAGGGATTACAACATGTGCTGTGAAACAATTTGTTAAGGTTGTATTCAGTGAGTTTTCACACTTGGAAAGACTTGAAGCTCTTGTTGATGTGGAAAATGTTGGGTCTCAAAGAGTGTTGGAGAAAGCTGGTTTCCAAAAGGAGGGAGTTCTAAGGAAGTATTTGATCAGGAAAGGAAAAAGCAGAGATACAATCATGTTCAGTCTTCTTTCTACTGATGTTTCGAAAATCCCAAGTTCAATACTGTGA 609 0.3711 MNNNSEKKLECLMEETCISSKENSIDLTQIRLRPFNLSDLDDLMVWKTDEKVDKFSFGEPYTSKEQGINFIENIAPKFQLCKAICLNDRAIGSILIYPSYDKSRNNSAELGYVLGSKYWGKGITTCAVKQFVKVVFSEFSHLERLEALVDVENVGSQRVLEKAGFQKEGVLRKYLIRKGKSRDTIMFSLLSTDVSKIPSSIL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00123 202 Pfam Acetyltransferase (GNAT) domain 30 166 IPR000182 GO:0016747
Trre10g00123 202 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 30 183 IPR000182 GO:0016747
Trre10g00123 202 Gene3D - 22 200 - -
Trre10g00123 202 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 21 193 - -
Trre10g00123 202 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 30 190 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00123 Trre-Chr10 853121 853729 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00123 Acetyltransf_3 4.7e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00123 - - tpra:123896460 289.656