Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00122 ATGGAGGAAACATTTATTTCTTCAAAACCATGTACCAAAGAAGAGAGCATTGATTTAACCAAAATCACACTCCGACCCTTTCATCTTTCAGACATCGACGATATCATGGTATGGTCAACCGATGAAAAAGTGGCCAAGTTCTGCTCTTGGGAACCTTACACCAGCAAAGATGATGCAATCAACTTCATTGAAAGTATAGAAACCAAGTTTCTACGTTGCAAAGCAATATGCCATAATGATCGTGCTATTGGGTGTATGCTTTTGTTTGCAAGTTCACTTGATGATAAAAGCAGGAACAAATCTGCAGAACTTGGATATAATCTAGGATCTAAATACTGGGGTAAAGGGATTGCAACATGTGCTGTGAAACAAATTGTTAAGGATACATTCAGTGAAATGTCACACTTGGAAAGGCTTGAAGCTCTTGTTGATGTGGAAAATATTGGGTCTCAAAGAGTGCTTGAGAAAGCTGGTTTCCAAAAGGAGGGAGTTCTAAGGAAGTATTTGTTTATGAAAGGAAAAAGTAGAGATATGATCATGTTCAGTATTCTTTCTACTGATCTCCAGCTATGA 573 0.3787 MEETFISSKPCTKEESIDLTKITLRPFHLSDIDDIMVWSTDEKVAKFCSWEPYTSKDDAINFIESIETKFLRCKAICHNDRAIGCMLLFASSLDDKSRNKSAELGYNLGSKYWGKGIATCAVKQIVKDTFSEMSHLERLEALVDVENIGSQRVLEKAGFQKEGVLRKYLFMKGKSRDMIMFSILSTDLQL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00122 190 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 22 177 IPR000182 GO:0016747
Trre10g00122 190 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 21 184 IPR016181 -
Trre10g00122 190 Gene3D - 13 190 - -
Trre10g00122 190 Pfam Acetyltransferase (GNAT) domain 22 160 IPR000182 GO:0016747
Trre10g00122 190 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 17 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00122 Trre-Chr10 851291 851863 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Trre10g00122 Acetyltransf_3 1.5e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00122 - - cam:101514530 272.707