Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00078 ATGGCTTCCACACCAAAGAAGGAGATAGTGTCACAAGTTCCTAATTTCATTCATGTCTACAACGACGGAACCATAGAACGTCTCAATGACATGCCAAAGGTCCCACCTTCACCACAAGACCCTGAAACAAATGTCTCATCTAAAGACATTCTCTTTTCCAATGACCCTTCACTCTTTGCTAGACTTTACCTACCAAAACTATCCAATCAAAACCAAAAAATACCAATCTTAGTTTATTTTCATGGTGGTGCATTTTGTTGTGAATCACCTTTTGCATCACACCATCACAAATATTGTAACATTATTGCTTCAAAAGGAAATGTTCTAATTTTTTCTATTGAATATAGAAGAGCACCAGAACATTTTCTTCCAACACAATATAATGATTGTTGGCTTGGTCTCAATTGGGTTGCATCACATAATACTACAATTGAAAATGTTCCAAAAAATAGTGACCCTTGGATTATTAATCATGGTGATTTTAACAAAGTTTTCATTGGTGGTGATAGTAGTGGTGCAAACATTGTTCACAACATTGCTATGCATGCAGGTGTTGAAAATTTACCTTATAGTGTTAAAATATTTGGTGCTTATATGAACCATCCATTTTTTTGGGGTTCAAAACCAATTGGGTTTGAAAGAGTTGAGAATTTTGAGAAAGTAAATGAATTTATTAATTTGCTATGGGAATTTGTGTACCCTTGTGGTCCTTTTGGGATAGATAATCCAAATGTGAATCCATTGGGACCAATGGCACCTAATTTGAGTACACTTGGTTGTTCTAAAATGCTTGTTACTGTTGCTGGCAATGATTGTTTTAGGGACAGAACAGTTTTGTATTATGAAGCTGTGAAAGGAAGTGATCAGTGGAAAGGTGAAGTGGAATTGTTTGAAGAAGAAGATGAAGATCATGTTTATTATATGTTCCACCCTGAATCTGATAAGGGCAAGAAACTCATCAAAGTTGTGGCAGATTTTCTTCACCAGTGA 990 0.3556 MASTPKKEIVSQVPNFIHVYNDGTIERLNDMPKVPPSPQDPETNVSSKDILFSNDPSLFARLYLPKLSNQNQKIPILVYFHGGAFCCESPFASHHHKYCNIIASKGNVLIFSIEYRRAPEHFLPTQYNDCWLGLNWVASHNTTIENVPKNSDPWIINHGDFNKVFIGGDSSGANIVHNIAMHAGVENLPYSVKIFGAYMNHPFFWGSKPIGFERVENFEKVNEFINLLWEFVYPCGPFGIDNPNVNPLGPMAPNLSTLGCSKMLVTVAGNDCFRDRTVLYYEAVKGSDQWKGEVELFEEEDEDHVYYMFHPESDKGKKLIKVVADFLHQ 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00078 329 Gene3D alpha/beta hydrolase 6 328 IPR029058 -
Trre10g00078 329 Pfam alpha/beta hydrolase fold 77 307 IPR013094 GO:0016787
Trre10g00078 329 SUPERFAMILY alpha/beta-Hydrolases 16 328 IPR029058 -
Trre10g00078 329 PANTHER ARYLACETAMIDE DEACETYLASE 12 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00078 Trre-Chr10 578457 579446 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00078 8 327 Carbohydrate Esterase AT3G48700 36.061 3.53e-68 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00078 - K13258 gmx:100814777 433.721