Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00069 ATGTCAAATGTATGGATATGTGAATTGTTATCATTAGTAACATTGTTGGTTTCATATAATGTCTTTGTGTGTGAATGTCAAGATCCCGGACCTATCCCTAAAGAAGCTGAAAACTGCAATGGAGTTTTCATTTCTTATGATTTACTCGATCGAAGGAAGGAATTCCCTCGCGTAAAGAATGTGACAGCACAATCTTGGGCCTTTAATGCAACTGCAAAAGTACTCAACACAGGAAAAGATGTTGTTAAATCATGGAAGTTGTTCATAGGATTTCAACATCATGAAATCCTTGTCTCTGCTTCTGGTGGTATTCCATTTGAAACTGGTGACTTTCCAGCTTCTGTTGAAAATGGGACAACCTTAGTTGGAAGTTCTCTTCCTGATTTGGAAAGTTCCATTAACACAGCCAATGATTTGACCCAAATTCAAGCATTGATTCAAATTGCTGGCACTCAATTTGGTGTTAGGCCACCTGGAATTCCCATGCCTAAGAACATCAAGTTGGTAAATGATGGATATAAGTGCCCCCAACCAAGTGTCAAGAAGAGTTCCATGTTTGCATGTTGTAAAAGCGACCCAAAATACAAGCCAAAACTTTTGAAGACAAAATTCTTGGCACGTCAAAAAGGTGATATAACCATATCCTATGATATTCTTCAAGCATATGACAACAACTATCTTGTTGAAGTGACAATGGAGAACAATAACCCTTTAGGAAGATTAGATCGTTGGAACTTAACATTTGAATGGACAAGAGGTGAATTCATATACTCAATGAAAGGAGCTTTCACACGCGAAATGGATTCCTCAAAATGCATCTATGGTGTTGCTGGACAATACTACAAAGATATGGATTTCACCAAAGTAACAAATTGTCAAAAGAATCCTATTATCAGTGATTTGCCACCAGAAAAATATAATGATACTGATATTGGTAAAATACCATTTTGTTGTAGAAATGGTTCTCTTTATTCTATAATTATGGATCCATCACAATCCAAATCTAAATTCCAAATGCAAGTGTTTAAATCTCCACCTGATTTGGATAAAAAATCTCTTTTCCCACCTGCAAGATGGAAAATTATGGGAGTTCTTAATGCAGATTATACTTGTGGACCACCTTTGAAAGTTGAACCTTCAACATTTCCAGAACCAAGAGGACTTGAAGCTACTGTTTTTGCTATTTCTACTTGGCAAATTGTTTGCAATATGTCCAAACCAAAACAGAGGAAAACTAGATGTTGTGTCACTTTTTCTGCTTACTACAATGATTCTGTTGTTCCTTGTAACACATGTGCTTGCGGTTGTGATAACGACGATTATTATGACGGAAAGACAAAACATCGGTGTGATCCGAATGCCAAAGCAATGCTACTTCCTTCCGAAGCTCTTCTTGTACCCTATGAGAATAGAACACTAAAAACAATTGCTTGGGCTAAGTTAAAGCATTCTCGTGTACCGAAAAGATTACCGTGTGGCGATAACTGTGGTGTTAGCATAAATTGGCACATAGTTTCAGATTATAAAGGTGGATGGAGTGCTAGAATCACTCTTTTCAATTGGAAATCTTTTCAATTTAAGGATTGGTTCACTGCCTTGCAATTCAAGAAAGGTGCTTCTCGTGGTTTTGAGAAAGTTTATTCTTTTAATGGCTCATTACTTACAAAATTCAACAACACTATTTTTATGCAAGGAATGTTGGGAGGAACAAATTATTTGATAGCACAAGACAATGACACCAATCCAAAGATTCCTGGTAAACAACAATCTGTTATTTCTTTTACCAAAAAATTTACACCAAAGATGAAAATAGCAAAAGGAGATGGGTTTCCTTCAAAAGTAATTTTCAATGGAGAAGAGTGTTCCATCCCTACTCAATTTCCAATGCAAAGTGGAAACCAACATAATGTATATTTAGTACAACAAATCTTAGCCTTAGTTTTAGCTTTTACAATCAATCAAATATTAATGTATTAG 1977 0.3586 MSNVWICELLSLVTLLVSYNVFVCECQDPGPIPKEAENCNGVFISYDLLDRRKEFPRVKNVTAQSWAFNATAKVLNTGKDVVKSWKLFIGFQHHEILVSASGGIPFETGDFPASVENGTTLVGSSLPDLESSINTANDLTQIQALIQIAGTQFGVRPPGIPMPKNIKLVNDGYKCPQPSVKKSSMFACCKSDPKYKPKLLKTKFLARQKGDITISYDILQAYDNNYLVEVTMENNNPLGRLDRWNLTFEWTRGEFIYSMKGAFTREMDSSKCIYGVAGQYYKDMDFTKVTNCQKNPIISDLPPEKYNDTDIGKIPFCCRNGSLYSIIMDPSQSKSKFQMQVFKSPPDLDKKSLFPPARWKIMGVLNADYTCGPPLKVEPSTFPEPRGLEATVFAISTWQIVCNMSKPKQRKTRCCVTFSAYYNDSVVPCNTCACGCDNDDYYDGKTKHRCDPNAKAMLLPSEALLVPYENRTLKTIAWAKLKHSRVPKRLPCGDNCGVSINWHIVSDYKGGWSARITLFNWKSFQFKDWFTALQFKKGASRGFEKVYSFNGSLLTKFNNTIFMQGMLGGTNYLIAQDNDTNPKIPGKQQSVISFTKKFTPKMKIAKGDGFPSKVIFNGEECSIPTQFPMQSGNQHNVYLVQQILALVLAFTINQILMY 658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00069 658 PANTHER COBRA-LIKE PROTEIN 7 6 651 - -
Trre10g00069 658 Pfam COBRA-like protein 226 405 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00069 Trre-Chr10 485423 487820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00069 33 652 COBRA Gene Family AT3G20580 56.140 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00069 - - gmx:100799716 973.385