Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre10g00039 ATGCGCGGAAACGGCATCGAAGACCGATGGGGATCAACCGCCGTACCGGCTATTCGGAAGAAAGGAACAAGTGTTCGTCCATGGCTTGTCGTCGACGGTACCGGAGATGCACAGGTTGTTGAGGTCGGTAAACATGCCATCATGAGACGTACTGGCCTCCCCGCTCGTGACCTTCGAATCCTTGATCCTCTTCTCTCTTACCCTTCCACCGTTCTCGGTAGAGAAAGAGCTATTGTCATCAATTTGGAACACATCAAAGCTATCATCACCGCTAACGAAGTTCTTCTTCTCAATTCAAGAGACCCTTCCGTTACCCCTTTCGTTCAAGAACTTCAAGCTAGGATCCTCCGTCACCACGAAGCTACCACCAACACTCATCCCGATAATCAAGACGACTCTCACGGCGGCGGAGGAATTAAGATTCTTCCATTCGAATTCGTAGCGCTGGAGGCGTGTCTTGAAGCGGCTTGCAGCGTGTTGGAGAATGAAGCGAAGACGTTGGAGCAAGAAGCACATCCTGCTCTTGATAAATTGACATCGAAGATCAGTACTCTTAATTTGGAACGTGTTCGTCAAATTAAGAGCCGATTGGTTGCTATAACCGGTCGTGTTCAAAAAGTTAGAGATGAATTGGAACATTTGCTTGATGATGATGAAGATATGGCTGAGATGTATCTGACTGAAAAGTTACTTCAACAGCAATTAGAACAAACTTCTTCTGAGGAAGATTCTGTTGTTGATACTCGTGATGACATGGATATTCATGATAGAGCTGAAATATCATTGGAAGCAGGTGTAGGAGGAAGGGAAAGTTACGAGGAACAAGAAGAAGATCACGATGATGATAATCATAATCATAATCCGGGAGAACAAATGTTTGGTGCTTCAAATCTAAGGGAAAGCCGTGGAACGCGTGCAAGCACTGTCTACAGTGCCGCCACCATCAAGCTTGACGTTGAGGAGCTTGAGATGCTCTTGGAAGCATACTTTGTTCAGATTGATGGCACTCTCAACAAGCTCTCCACGCTGAGGGAGTATGTGGATGACACTGAGGATTACATCAACATAATGCTGGATGACAAACAGAACCATCTTCTCCAAATGGGAGTCATGTTGACCACAGCGACTCTGGTAGTGAGTGCGTTTGTTGTTGTGGCTGGTGTTTTTGGCATGAATATTACTATTGAACTGTTTAATGATAACGTGCATGGGATGACGAACTTTCTCTGGACTGTTGGTGGAGGGACTGCCGGGACCATATTCTTGTATGTGGTTGCCATTGCCTGGTGCAAGCACAAAGGCTTGCTAGAATAA 1314 0.4597 MRGNGIEDRWGSTAVPAIRKKGTSVRPWLVVDGTGDAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTVLGRERAIVINLEHIKAIITANEVLLLNSRDPSVTPFVQELQARILRHHEATTNTHPDNQDDSHGGGGIKILPFEFVALEACLEAACSVLENEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKVRDELEHLLDDDEDMAEMYLTEKLLQQQLEQTSSEEDSVVDTRDDMDIHDRAEISLEAGVGGRESYEEQEEDHDDDNHNHNPGEQMFGASNLRESRGTRASTVYSAATIKLDVEELEMLLEAYFVQIDGTLNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGVFGMNITIELFNDNVHGMTNFLWTVGGGTAGTIFLYVVAIAWCKHKGLLE 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre10g00039 437 MobiDBLite consensus disorder prediction 261 300 - -
Trre10g00039 437 Gene3D Magnesium transport protein CorA, transmembrane region 102 365 - -
Trre10g00039 437 FunFam Magnesium transporter MRS2-1 16 99 - -
Trre10g00039 437 MobiDBLite consensus disorder prediction 234 253 - -
Trre10g00039 437 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 436 IPR039204 -
Trre10g00039 437 Coils Coil 150 170 - -
Trre10g00039 437 MobiDBLite consensus disorder prediction 261 287 - -
Trre10g00039 437 CDD Mrs2_Mfm1p-like 28 435 IPR039204 -
Trre10g00039 437 Gene3D - 15 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre10g00039 Trre-Chr10 336594 338397 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre10g00039 28 437 MRS2 Gene Family AT3G19640 65.333 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre10g00039 - - zju:107427020 551.206