Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99978g00001 ATGTTCACTGCGGGGACAGACACGACAACAAGCACACTAGAATGGGCGATGGCAGAACTTCTACACAACCCAAGAACGCTAAAGAAAGTGCAAATGGAACTAAGGAGCAAAATAGGAGCAGATAGGAAATTTGAAGAAAATGACATAGAGAATCTTCCCTACCTCAAAGCAGTTATCAAGGAGACGTTGAGACTTCACCCACCTCTTCCATTTTTGGTTCCTCACATGGCCATGGACTCTTGCAAGATTGGAGACTACTACATTCCCAAAGAAACACAAATTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCAAAAGTGTGGGATGCTCCTTTATTGTTCTGGCCAGAAAGGTTTATGGAGCCAAACATGGTAGATTACAAGGGACACCATTTTGAGTTTATACCTTTTGGTTCAGGTCGAAGAATGTGCCCAGCAATGCCTCTTGCCTCGCGTGTGCTTCCACTGGCACTAGGCTCACTCCTCAGCTACTTTGATTGGATTTTGCCCGATGGCCTGAAGCCAGAGGATATGGACATGACAGAGGGAATGGGAATAACATTGAGAAAAGCTGTTCCTTTGAAAGCCATACCTGTGCCTTACAAAA 607 0.4498 MFTAGTDTTTSTLEWAMAELLHNPRTLKKVQMELRSKIGADRKFEENDIENLPYLKAVIKETLRLHPPLPFLVPHMAMDSCKIGDYYIPKETQILVNVWAIGRDPKVWDAPLLFWPERFMEPNMVDYKGHHFEFIPFGSGRRMCPAMPLASRVLPLALGSLLSYFDWILPDGLKPEDMDMTEGMGITLRKAVPLKAIPVPYK 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99978g00001 202 PRINTS P450 superfamily signature 135 144 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS P450 superfamily signature 57 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS P450 superfamily signature 4 21 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 FunFam Predicted protein 2 196 - -
Trme99978g00001 202 SUPERFAMILY Cytochrome P450 1 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 Pfam Cytochrome P450 1 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS E-class P450 group I signature 97 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS E-class P450 group I signature 134 144 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS E-class P450 group I signature 56 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS E-class P450 group I signature 13 39 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PRINTS E-class P450 group I signature 144 167 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 137 146 IPR017972 GO:0005506|GO:0016705
Trme99978g00001 202 Gene3D Cytochrome P450 1 198 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99978g00001 202 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 1 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99978g00001 Trme-Chr99978 1 607 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99978g00001 1 202 Cytochrome P450 AT3G52970 69.268 1.12e-90 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99978g00001 - - tpra:123898388 420.624