Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99925g00001 ATGTTGGCAGAAGCACAGATAGATAAAATTCGCCTGAAAGATGATAATGTCATTAAATCAGATGTTCCTTCTATCAAGGTGGATGCACAGCTTACATGTGCTGCTGTGGAGGGCAACCAAAGCCCATTGCTTGATATTAATAATAATGAGGAATCTCCCAGCAAAACAGAAAATAAAAGACCAGCTCTTGTTGGACAAAACCTGTCTGAAAAGCTCTCATCAAGTCAAGATCTCTGCATAGGTCCTGACAATCCTCAGACCCTGTTATCTGCACAATATTCAAAACGGTCACGATCTCAATTGAAATCTTATATTTCCCACCTAGCAGAGGAGATGTACATCTATAGATCCTTACCCCTTGGGCAAGACCGCAGACATAATCGATATTGGCAATTTGTTGCATCTGCTTCTTGCAATGATCCTGGCTCGGGAAGGATCTTTGTTGAATATCATGATGGCAAATGGAGGCTTATTGATTCTGAAGAG 486 0.4115 MLAEAQIDKIRLKDDNVIKSDVPSIKVDAQLTCAAVEGNQSPLLDINNNEESPSKTENKRPALVGQNLSEKLSSSQDLCIGPDNPQTLLSAQYSKRSRSQLKSYISHLAEEMYIYRSLPLGQDRRHNRYWQFVASASCNDPGSGRIFVEYHDGKWRLIDSEE 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99925g00001 162 MobiDBLite consensus disorder prediction 42 61 - -
Trme99925g00001 162 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 116 152 IPR028941 -
Trme99925g00001 162 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 1 162 IPR044977 GO:0006357
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99925g00001 Trme-Chr99925 154 639 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99925g00001 1 162 Homeobox Transcription Factor Family AT5G44180 40.984 1.35e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99925g00001 - - adu:107480767 246.128