Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99817g00001 CATTCGTTCGATAGGTCTCTTGGTGGTAGGCATTTTGATGAGGTTTTGTTCCATCATTTTGCTGGGAAGTTTAAGGAGTACAAAATTGACGTGCTTCAGAATGTTGGGGCATGTTTGAGGAAGATGAAGAAGATGCTCAGCGCAAACCCCGTGGTGCCTCTGAATATTGAGTGCTTGATGAATGAGAAGGGTATCATGAAGCGTGATGAGTTTGAGGAACTGAGTCTCCCGATTTTGGAGCGTGTCAAGGGACCTTTGGAGAGGGCACTTGCCGAARCAGGACTCTCTGTTGATGATATACATATGGTTGAGGTCAACGAAAGCTTTCCTTTTGCAACTTCTCTTGCATGGAAAGGTTCTGCTCCAGATGCACAGGATAGTGGACCTGATAATCAACAGAGTTCCCTTGTTTTTCCCATACCAAGTATCAAGGCACT 437 0.4508 HSFDRSLGGRHFDEVLFHHFAGKFKEYKIDVLQNVGACLRKMKKMLSANPVVPLNIECLMNEKGIMKRDEFEELSLPILERVKGPLERALAEXGLSVDDIHMVEVNESFPFATSLAWKGSAPDAQDSGPDNQQSSLVFPIPSIKAL 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99817g00001 146 Gene3D - 2 104 - -
Trme99817g00001 146 Gene3D Actin; Chain A, domain 4 8 81 - -
Trme99817g00001 146 MobiDBLite consensus disorder prediction 120 141 - -
Trme99817g00001 146 Pfam Hsp70 protein 2 104 IPR013126 GO:0005524|GO:0140662
Trme99817g00001 146 MobiDBLite consensus disorder prediction 125 139 - -
Trme99817g00001 146 PANTHER HSC70CB, ISOFORM G-RELATED 1 105 - -
Trme99817g00001 146 SUPERFAMILY Actin-like ATPase domain 2 104 IPR043129 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99817g00001 4 103 Calmodulin-binding Proteins AT1G16030 27.273 3.52e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99817g00001 K09489 - gmx:100816539 167.548