Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99716g00001 GGAGGACTTTTCCGTAGTGTAACTGTGACGCCTTCAAAGAGATTAAAAGGAAAGAAGAATCGTAAGATTAATGTTACTACTGACAGCAAAAATCTATCGCTTGGTTCCTTGGAAGAGTTGTCCAAGGCTCGACGTTCAGTGCTTGATCCTCCTTGGGAAGGACAAAACTTGATTCCTGGTGATGTTTTGTGGTCTGATCCTTCAAAAACGTCTGGTCTTTCTCCAAACAAAGAGAGAGGCATTGGCTTGGTTTGGGGTCCCGATGTTACTGAAGCATTTTTGAAGAAGTACCAATTTAAG 300 0.4233 GGLFRSVTVTPSKRLKGKKNRKINVTTDSKNLSLGSLEELSKARRSVLDPPWEGQNLIPGDVLWSDPSKTSGLSPNKERGIGLVWGPDVTEAFLKKYQFK 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99716g00001 100 Gene3D - 15 100 IPR029052 -
Trme99716g00001 100 MobiDBLite consensus disorder prediction 1 20 - -
Trme99716g00001 100 SUPERFAMILY Metallo-dependent phosphatases 48 100 IPR029052 -
Trme99716g00001 100 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 1 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99716g00001 Trme-Chr99716 1 300 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99716g00001 1 100 Calmodulin-binding Proteins AT5G63870 65.347 9.32e-41 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99716g00001 K04460 - gmx:100810695 179.874