Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme996g00001 GGGTACGATACAAAAGTAGGGGAGAGAGGGATTCAACTTTCTGGAGGACAGAAGCAGCGTGTGGCAATTGCGAGAGCCATAGTTAACAGTCCAAGAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCTGRGTCTGAAAAAGTGGTTCAGGATGCACTTGATAGAGTGAGGATGGACAGAACCACCATTGTGGTGGCTCATAGATTATCTACCATAAAGGGTGCAAACTTAATTGCAGTGGTTAAAAATGGAGTGATTGAAGAGAAAGGAAAGCATGACACGTTGCTCAACAATGGTGGTACCTATGCTTCTTTAGTAGCACTGCACACAACTACCACAGCCTCATCTTAA 357 0.437 GYDTKVGERGIQLSGGQKQRVAIARAIVNSPRILLLDEATSALDAXSEKVVQDALDRVRMDRTTIVVAHRLSTIKGANLIAVVKNGVIEEKGKHDTLLNNGGTYASLVALHTTTTASS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme996g00001 118 Gene3D - 1 117 IPR027417 -
Trme996g00001 118 Pfam ABC transporter 3 41 IPR003439 GO:0005524
Trme996g00001 118 PANTHER ABC TRANSPORTER B FAMILY 1 110 IPR039421 -
Trme996g00001 118 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 110 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme996g00001 Trme-Chr996 147 503 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme996g00001 1 114 Calmodulin-binding Proteins AT2G36910 60.345 3.16e-39 137