Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99627g00001 ATGGAGACACGTGGCGCTGACATGGAAAAGTGGACGGATGAACCGTTGGGATTTGAAGAAGTTGATCGTTTGGTTTATCTTAAAGCTGCCTTGTCGGAGACACTAAGGTTGTACCCTTCGGTGCCAGAGGATTCAAAGCATGTGGTGAACGATGATGTGTTGCCGGATGGAACTTTTGTTCCGGCAGGATCATCGGTGACATACTCGATATATTCAGCCGGGAGATTGAAGTCAACATGGGGTGAGGATTGCTTGGAATTTAGACCCGAGAGGTGGTTGTCATTGGATGGAACAAAGTTCATCATGCATGACTCTTTCAAGTTTGTTGCATTCAATGCTGGCCCTAGAATATGTTTGGGGAAGGATTTAGCATATCTTCAGATGAAGTCTATCGCCGCTGCTGTTCTGCTCCGCCACCGTCTTGCGGTGGTTCCCGGTCACCAGGTGGAGCAAAAGATGTCACTCACCTTGTTCATGAAAAATGGGCTCAAGGTTAATGTTTACAACAGGGATTTGAGGGGTATTTTTGCAAATATAGAAAATGAAAAGGTTGGAGAGATTCAGGGGAAAGTGTCCAATGATTTGAAATGCAATGGAAGTTAG 603 0.4544 METRGADMEKWTDEPLGFEEVDRLVYLKAALSETLRLYPSVPEDSKHVVNDDVLPDGTFVPAGSSVTYSIYSAGRLKSTWGEDCLEFRPERWLSLDGTKFIMHDSFKFVAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLAVVPGHQVEQKMSLTLFMKNGLKVNVYNRDLRGIFANIENEKVGEIQGKVSNDLKCNGS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99627g00001 200 PRINTS P450 superfamily signature 118 129 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS P450 superfamily signature 29 40 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS P450 superfamily signature 109 118 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 Pfam Cytochrome P450 18 160 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 SUPERFAMILY Cytochrome P450 13 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 111 120 IPR017972 GO:0005506|GO:0016705
Trme99627g00001 200 PANTHER CYTOCHROME P450 17 165 - -
Trme99627g00001 200 Gene3D Cytochrome P450 5 170 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS E-class P450 group IV signature 102 118 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS E-class P450 group IV signature 118 136 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS E-class P450 group IV signature 75 93 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99627g00001 200 PRINTS E-class P450 group IV signature 24 40 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99627g00001 Trme-Chr99627 62 664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99627g00001 1 199 Cytochrome P450 AT1G01600 76.500 1.64e-105 312
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99627g00001 K15398 - gmx:100779986 337.035