Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99617g00001 ATGTTGATTGAGATCATTGTGATGTACCCCATCCAGCATAGAGCTTACAGAGATGGTATTGACAACTTGTTGGTACTTCTCATTGGAGGTATCCCAATTGCCATGCCAACTGTCTTGTCTGTGACCATGGCTATCGGATCTCACCGCCTTTCTCAGCAAGGAGCTATTACCAAGAGAATGACAGCTATTGAAGAAATGGCAGGAATGGATGTTCTCTGCAGTGACAAGACTGGAACTCTAACTCTTAACAAGCTTACTGTGGACAAGACCTTGATTGAG 279 0.4409 MLIEIIVMYPIQHRAYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKTLIE 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99617g00001 93 PANTHER CALCIUM-TRANSPORTING ATPASE 1 93 - -
Trme99617g00001 93 ProSitePatterns E1-E2 ATPases phosphorylation site. 75 81 IPR018303 -
Trme99617g00001 93 Gene3D - 1 88 - -
Trme99617g00001 93 SUPERFAMILY Calcium ATPase, transmembrane domain M 3 68 IPR023298 -
Trme99617g00001 93 FunFam Phospholipid-transporting ATPase IC 70 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99617g00001 Trme-Chr99617 353 631 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99617g00001 1 93 Primary Pumps ATPases AT2G07560 96.774 1.88e-56 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99617g00001 K01535 - osa:4331015 180.644