Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99559g00001 ATGATGGATAGTAGAGAGGCTATGCCATTCTCTGGTGTCCCTGGTTCATATTACATGCATAGAGGAGGGGTTGATGTTGTAGGGTCTGGTGGCTCTGGAGGGTTCCAAGTACCTCCTGGATTCAGAGCTATGCCAAACACTGGCATTATATCTCAGCCAAATGTTAGGGGTCAAGGTGGTAATGTTGACTCTAGTTCAACATTTCCATTGGAGACTCAGTCTCATCACTCTCATGCCAATTTTAATCATGGCATTAATATTGGTGCATCTTCTGGGGGACCTTCTAGTGAGCCTGTGAAAAAGAAAAGAGGGAGACCGCGGAAATACGGTCCTGATGGATCGGTTTCTTTGAAACTGTCTCCAATGTCTGCCCCTGCTAATTCTACTCAGGGTTCATCCACACCTTCTGATAAACGGGGTAGAGGACGTCCTCGTGGATCTGGAAGGAAACAACAG 456 0.4671 MMDSREAMPFSGVPGSYYMHRGGVDVVGSGGSGGFQVPPGFRAMPNTGIISQPNVRGQGGNVDSSSTFPLETQSHHSHANFNHGINIGASSGGPSSEPVKKKRGRPRKYGPDGSVSLKLSPMSAPANSTQGSSTPSDKRGRGRPRGSGRKQQ 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99559g00001 152 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 69 150 IPR039605 GO:0003680
Trme99559g00001 152 MobiDBLite consensus disorder prediction 120 137 - -
Trme99559g00001 152 MobiDBLite consensus disorder prediction 50 152 - -
Trme99559g00001 152 MobiDBLite consensus disorder prediction 50 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99559g00001 Trme-Chr99559 238 693 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99559g00001 2 152 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 39.181 1.05e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99559g00001 - - gmx:100813888 142.51