Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme995170g00001 ATGAGCATTGATCTTATCGGGAAAGCTGTATATACTGCAATATGGGTTGCTGCTGTGTCATTGTTCATGGAATTACTGGGTCTCTCAACACAGAAGTGGTTGACTGCTGGTGGTATGGGTACAGTATTGCTTTCGCTTGCAGGTCGTGAGGTACAGTAA 159 0.4465 MSIDLIGKAVYTAIWVAAVSLFMELLGLSTQKWLTAGGMGTVLLSLAGREVQ 52
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme995170g00001 52 PANTHER OW CONDUCTANCE MECHANOSENSITIVE CHANNEL 1 51 IPR045042 -
Trme995170g00001 52 Gene3D - 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme995170g00001 Trme-Chr995170 11 169 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme995170g00001 1 51 Mechanosensitive Ion Channel Family AT5G10490 74.510 4.62e-23 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme995170g00001 K22047 - mtr:11434686 95.1301