Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99514g00001 GTCAAAGGCGAACCAAACATATCTTACATATGTTCTAGGTATTATAGAGCTCCTGAGCTTATATTTGGTGCAACTGAGTACACCACAGCCATTGACATTTGGTCAGCTGGTTGTGTACTTGGCGAACTATTGCTTGGCCAGCCTCTTTTTCCCGGTGCAAGTGGAGTAGATCAGCTTGTTGAAATTATCAAGGTGAGATGA 201 0.4328 VKGEPNISYICSRYYRAPELIFGATEYTTAIDIWSAGCVLGELLLGQPLFPGASGVDQLVEIIKVR 66
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99514g00001 66 Gene3D Transferase(Phosphotransferase) domain 1 1 66 - -
Trme99514g00001 66 SUPERFAMILY Protein kinase-like (PK-like) 4 65 IPR011009 -
Trme99514g00001 66 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 1 65 - -
Trme99514g00001 66 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme99514g00001 66 Pfam Protein kinase domain 7 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99514g00001 Trme-Chr99514 192 485 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99514g00001 9 59 MAP Kinase Gene Family AT2G46070 62.745 1.41e-20 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Trme99514g00001 Pkinase 4.9e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99514g00001 K27413 - ccaj:109811072 133.265