Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99428g00001 ATGGCGACAACTAATCGCACAGTGTTGCAATTCTCTTCATCTTCTTCGTCTTCCCAGAGCTTATCCGCTAAGGTTCACCCTCTTGTTGTCTTCAACATCTGCGACTGCTACGTTCGTCGCCCTGATCAAGCCGAACGCGTCATTGGNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGTTCCTCACAGCGAGTCTCTCGATCAG 231 0.381 MATTNRTVLQFSSSSSSSQSLSAKVHPLVVFNICDCYVRRPDQAERVIGXXXXXXXXXXXXXXXXXXXVPHSESLDQ 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99428g00001 77 Gene3D Cytidine Deaminase, domain 2 9 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99428g00001 Trme-Chr99428 402 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99428g00001 2 77 Eukaryotic Initiation Factors Gene Family AT2G39990 46.250 7.66e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99428g00001 K03249 - gmx:100790913 92.4337