Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99273g00001 ATGTCTATGAAAAAGAAACATCAATGGGAAAACAYTACAAAGAGAKTAGGGCATGTTGATGGAATTAATGTTGGTGACTTGTTTCGATACAGRGCTGAACTTGTTGTCATCGGTCTTCATAAACGATTCCAAAATGGTATTGATTATTTGGGTAAAAGTGAGAACTCTTTGGCTACTAGCATTGTTGCAACTCCTAAGTATGCTAATGTTATGAAGTCTAGTGGTTGTTTGATTTATGAAGGTCAAGGGACTAACCCTAGAGTACGGAAACCTGTCGCGCATCATGATCAGAAATTGGAAACCGGAAATCTTGCTTTGTGGAATAGTATGAATGCGAAGAGACCTGTTAGGGTTATATTGAAGATTTCCGGAAAATTTAAATATGATGGGTTGTATTTGGTTGACAAAATGACTCAAGAAAGGGGAGAAT 430 0.3698 MSMKKKHQWENXTKRXGHVDGINVGDLFRYRAELVVIGLHKRFQNGIDYLGKSENSLATSIVATPKYANVMKSSGCLIYEGQGTNPRVRKPVAHHDQKLETGNLALWNSMNAKRPVRVILKISGKFKYDGLYLVDKMTQERGE 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99273g00001 143 Gene3D - 1 143 IPR036987 -
Trme99273g00001 143 ProSiteProfiles YDG domain profile. 17 143 IPR003105 -
Trme99273g00001 143 SUPERFAMILY PUA domain-like 2 142 IPR015947 -
Trme99273g00001 143 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 3 142 - -
Trme99273g00001 143 Pfam SAD/SRA domain 16 142 IPR003105 -
Trme99273g00001 143 SMART G9a_1 12 143 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99273g00001 Trme-Chr99273 1 430 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99273g00001 11 143 Su(var)3-9 homologs AT1G73100 43.056 8.15e-24 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99273g00001 - - tpra:123891631 246.514