Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99267g00001 ATGTTTGGTGGAACTGAGACAGTAGCATCAGTGATAGAATGGGCATTGGCAGAACTCATGAAAAGCCCAAAAGATCTTCAAAAAGTTCAACAAGAGCTCACCGACGTTATAGGTTTAGATCGGAGATTCAACGAAACCGATCTAGAAAAATTGACTTATCTCAAATGCATCATCAAAGAAACATTGCGACTCCACCCTCCAATTCCCTTACTCCTCCATGAGACAGCGGAAGATACTAATATCGCAG 247 0.417 MFGGTETVASVIEWALAELMKSPKDLQKVQQELTDVIGLDRRFNETDLEKLTYLKCIIKETLRLHPPIPLLLHETAEDTNIA 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99267g00001 82 Gene3D Cytochrome P450 1 82 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 PRINTS P450 superfamily signature 3 20 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 PRINTS P450 superfamily signature 56 67 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 SUPERFAMILY Cytochrome P450 1 81 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 PRINTS E-class P450 group I signature 55 73 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 PRINTS E-class P450 group I signature 12 38 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 Pfam Cytochrome P450 1 81 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme99267g00001 82 PANTHER CYTOCHROME P450 84A1-RELATED 1 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99267g00001 Trme-Chr99267 15 261 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99267g00001 1 81 Monolignol Biosynthesis Gene Families AT4G36220 77.778 2.19e-42 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99267g00001 K09755 - vvi:100267863 136.732