Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme992411g00001 ATGGTGCAAGAGCTATTGCAGGACTTTTTTAAAAGAAAGGAACTGTGCAAGAGCATCAACCCTTATAAGGCTGTTGCCTTTGGGGCAGGTGCGCAGGCTGCTTTGTTGACGGAAGGCATCAAGAATGTTCCTAACTTGGTTTTGATTGATG 151 0.4503 MVQELLQDFFKRKELCKSINPYKAVAFGAGAQAALLTEGIKNVPNLVLID 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme992411g00001 50 Gene3D - 20 34 - -
Trme992411g00001 50 Pfam Hsp70 protein 1 50 IPR013126 GO:0005524|GO:0140662
Trme992411g00001 50 SUPERFAMILY Actin-like ATPase domain 2 36 IPR043129 -
Trme992411g00001 50 Gene3D - 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme992411g00001 Trme-Chr992411 1 151 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme992411g00001 2 50 Calmodulin-binding Proteins AT1G16030 64.000 4.98e-15 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme992411g00001 K03283 - lja:Lj0g3v0098949.1 70.8626