Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme9923g00001 ATGGATGAAATTCAAGAAGTGCTACAAGTGAGCTATAATGGATTAACAAGGCGTGAGAAGGAAATTTTTCTAGACATTGCATTCTTTTTTGAAGGTGAAAATAAAGATTTCGCCACAACGATACTAGATGCATGTGGTTTTGGTGCTACTAGTGGAATACAAATACTCGAAGATAAAGCTCTTGTATCTATTTCTTGCAATAGAATACAAATGCATGACTTACTACAAAAAATGGCTTTTGATATAGTTCGTAATGACCAAAGATTAAAGCATAGCCGATTGAAGGATATTGAAGAAATTCATCATGTACTTAAAAATAACAAGGCGGCCGATGTTGTTGAAGGCATACAATTTGATTTGTCTCAAAAAGAAAATTTACATGTCAAAGCTGAAACATTCAACACCATGGTTGATCTAAGAATTCTTAGATTATATGTCCCCTTGGGTAAGAAGAGATTGGCAATCTTGTCTCATTCTGATAAAGGCATTATGCAATTTTCTGATAAACTTAGATATTTTGAGTGGAATGGATACCTTCTGAAGTCTCTTCCACATCATTTTTGTGCTAAGCTTCTTGTTGAGATTCACTTGCCGCATAGCAATGTTGAATATCTCTGGCATGGGATACAGGAACTTATGAATTTAGAGGTAATCAACCTAAGTGAGTGCAAAGATTTGATCAACCTCCCAGATTTGTCTCAGGCATCAAAACTTAAATGGTTGTACCTTTCAGGCTGTGAAAGTTTGTGTGAAATTCAACCCTCCATTTTTTCTAAGGATACACTTGTTACTTTGCTAGTTGATAGGTGTCCAAAACTAGAAGGTCCCAAGAATGAGAAACACTTAAGGACTCTGCAGAAGATCAATGTTTATGGCTGCTCAAGCCTTAAGGAATTTTCATTGTCCTCAGATTCAATTGAGAATCGGGATATAAGCAATACAGGAGTTGAAATATTTCACTCATCAATAAGTGGTATGAGCAAGCTTGGGTGGCTCAATTTAGAAGGTTTAGAACTCTCGAATCTACCAAATAAGTTGTCTTGTTTGGAATTACTTGCGGAGCTTCAAGTTTCTTACTGTGATATAGTAACTAAATTGAAGTTGGAAGATGTGCAGTACTTCTTCCTCTCCCAGGGCTTCCTCTCGAAATCAAAGTGTTTCGTGCTGAAAACTGCACTTCATTGGTCACCGTATCCACTTTGA 1203 0.3658 MDEIQEVLQVSYNGLTRREKEIFLDIAFFFEGENKDFATTILDACGFGATSGIQILEDKALVSISCNRIQMHDLLQKMAFDIVRNDQRLKHSRLKDIEEIHHVLKNNKAADVVEGIQFDLSQKENLHVKAETFNTMVDLRILRLYVPLGKKRLAILSHSDKGIMQFSDKLRYFEWNGYLLKSLPHHFCAKLLVEIHLPHSNVEYLWHGIQELMNLEVINLSECKDLINLPDLSQASKLKWLYLSGCESLCEIQPSIFSKDTLVTLLVDRCPKLEGPKNEKHLRTLQKINVYGCSSLKEFSLSSDSIENRDISNTGVEIFHSSISGMSKLGWLNLEGLELSNLPNKLSCLELLAELQVSYCDIVTKLKLEDVQYFFLSQGFLSKSKCFVLKTALHWSPYPL 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme9923g00001 400 Gene3D Ribonuclease Inhibitor 80 390 IPR032675 -
Trme9923g00001 400 SUPERFAMILY "Winged helix" DNA-binding domain 2 89 IPR036390 -
Trme9923g00001 400 Pfam Leucine Rich Repeat 192 210 IPR011713 -
Trme9923g00001 400 SUPERFAMILY L domain-like 71 364 - -
Trme9923g00001 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 356 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme9923g00001 Trme-Chr9923 35 1678 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme9923g00001 4 360 WRKY Transcription Factor Family AT4G12020 33.871 2.23e-40 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme9923g00001 - - mtr:11419903 455.677