Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme991660g00001 ATGGGTGCCTCCAAAGGCATACTATATCTGCATACAGAGGCTAACCCTCCTATATACCACAGAGATATTAAAGCCAGTAACATACTTCTAGACTCTAAGTTTACAGCTAAAGTGGCTGATTTTGGATTGTCGCGGCTTATACCATACTCAGATGAAGATGGTC 163 0.4172 MGASKGILYLHTEANPPIYHRDIKASNILLDSKFTAKVADFGLSRLIPYSDEDG 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme991660g00001 54 Pfam Protein kinase domain 5 49 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme991660g00001 54 SUPERFAMILY Protein kinase-like (PK-like) 3 51 IPR011009 -
Trme991660g00001 54 ProSiteProfiles Protein kinase domain profile. 1 54 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme991660g00001 54 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 2 50 - -
Trme991660g00001 54 ProSitePatterns Serine/Threonine protein kinases active-site signature. 18 30 IPR008271 GO:0004672|GO:0006468
Trme991660g00001 54 Gene3D Transferase(Phosphotransferase) domain 1 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme991660g00001 Trme-Chr991660 1 163 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme991660g00001 1 53 Receptor kinase-like Gene Family AT5G01950 75.472 8.92e-24 89.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Trme991660g00001 Pkinase 2e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme991660g00001 - - ccaj:109788950 107.457