Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99149g00001 GGTGTTAAAGACAAACCTATGATTAGTATTAAGTACAAGGGTCAGGAGAAGCTTCTTTGTGCTGAGGAAATTTCATCTATTGTGCTCACAAAAATGAAGGAGATTGCAGAAGCTTATTTGGAATCACCTGTTAAAAATGTAGTTGTCACTGTGCCTGCTTACTTCAATGATTCTCAACGAAATGCCACCATTGATGCTGGTGCCATTGCTGGCCTTAATGTTTTGAGGATAATCAATGAACCAACTGCTGCAGCTATTGCATACAGCCTTGACAAGAGAAGGAACTGTGATGGTGAACGGAATATTTTTGTGTTTGATCTTGGTGGTGGGACTTTTGATGTGTCTCTCCTCACAATTAAAGGTGATGTCTTCAAAGTTAAAGCCACTGCTGGAAATACTCATCTTGGGGGAGAGGACATTGATAACAGAATGTTAAACTACTTTGTTCAAGAATTCAAGAGGAAGAAAAAAGTAGATATTACTAGTAATCCGAGAGCCTTGAGGAGGTTGAGAACTGCATGTGAAAAGGCGAAAAGGGAACTTTCTTTCAAATTGGTCACCAGTATTGATCTTGATTGTTTATGTAAGGGCATTGATTTCTCTTCATCAATCACTCGTGTAGAGTTTGAGGAAATCAATATGGACCTTTTTAATGAGTGTATGAAGACTGTTGAGAGTTGTCTTACTGATTCA 693 0.3853 GVKDKPMISIKYKGQEKLLCAEEISSIVLTKMKEIAEAYLESPVKNVVVTVPAYFNDSQRNATIDAGAIAGLNVLRIINEPTAAAIAYSLDKRRNCDGERNIFVFDLGGGTFDVSLLTIKGDVFKVKATAGNTHLGGEDIDNRMLNYFVQEFKRKKKVDITSNPRALRRLRTACEKAKRELSFKLVTSIDLDCLCKGIDFSSSITRVEFEEINMDLFNECMKTVESCLTDS 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99149g00001 231 Gene3D Actin; Chain A, domain 4 136 218 - -
Trme99149g00001 231 FunFam Endoplasmic reticulum chaperone BiP 10 104 - -
Trme99149g00001 231 Gene3D - 1 133 - -
Trme99149g00001 231 PRINTS 70kDa heat shock protein signature 47 67 - -
Trme99149g00001 231 PRINTS 70kDa heat shock protein signature 110 120 - -
Trme99149g00001 231 FunFam Heat shock 70 kDa 136 219 - -
Trme99149g00001 231 SUPERFAMILY Actin-like ATPase domain 99 230 IPR043129 -
Trme99149g00001 231 Pfam Hsp70 protein 3 231 IPR013126 GO:0005524|GO:0140662
Trme99149g00001 231 SUPERFAMILY Actin-like ATPase domain 3 92 IPR043129 -
Trme99149g00001 231 ProSitePatterns Heat shock hsp70 proteins family signature 2. 104 117 IPR018181 -
Trme99149g00001 231 PANTHER HEAT SHOCK PROTEIN 70KDA 3 231 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99149g00001 Trme-Chr99149 2 694 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99149g00001 1 231 Calmodulin-binding Proteins AT5G02500 70.563 2.34e-117 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99149g00001 K03283 - vvo:131625172 372.474