Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme99026g00001 GTCGTCTTTGGTGGCCGACTAACTTGGCTTATTTTTCAGATTACTGTTATGCTGATGTCACTGAAAGCAGGAAACCTTGGTTTGAATATGGTTGCTGCATGTCATGTTATTCTTTTGGATCTTTGGTGGAATCCAACTACTGAAGATCAAGCTATTGATCGAGCTCATAGAATTGGACAGACTCGCCCTGTTACTGTGACACGGATCACCATTAAAGATACAGTTGAAGATAGAATACTGGCTCTTCAGGTTTAA 255 0.4078 VVFGGRLTWLIFQITVMLMSLKAGNLGLNMVAACHVILLDLWWNPTTEDQAIDRAHRIGQTRPVTVTRITIKDTVEDRILALQV 84
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme99026g00001 84 CDD SF2_C_SNF 13 68 - -
Trme99026g00001 84 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 14 83 - -
Trme99026g00001 84 Gene3D - 12 84 IPR027417 -
Trme99026g00001 84 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 14 83 IPR027417 -
Trme99026g00001 84 Pfam Helicase conserved C-terminal domain 17 59 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme99026g00001 Trme-Chr99026 243 497 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme99026g00001 13 83 RAD5 or RAD16-like Gene Family AT1G61140 85.915 7.48e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme99026g00001 - - gmx:100795142 143.28