Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98962g00001 ATGATGATTTCGAGAGGTTTGTTCGGGTGGTCCCCACCGCACGTACAACCGCTCACACCGGTTTCGGAGGTATCGGAGCCACCGGAATCTCCGTCACCGTATGTAGACCCCGGAGCTGAGACCTCCGCGTCGCAACAGGTGGAAGTTGAAGAGGAAATGGAGGAACAGGAGGAAATGGAACCGGCGCCAGCTGCGGTACCTTTCTCGAAGCTTTTCGCGTGTGCTGATCGGTTTGATTGGTTTCTCATGGCGGTTGGTTCTGTTGCTGCTGCGGTTCATGGAACCGCTCTTGTAGTTTACTTGCATTACTTTGCTAAGATTATTCATATTATGCGGATGGATGATCA 347 0.5216 MMISRGLFGWSPPHVQPLTPVSEVSEPPESPSPYVDPGAETSASQQVEVEEEMEEQEEMEPAPAAVPFSKLFACADRFDWFLMAVGSVAAAVHGTALVVYLHYFAKIIHIMRMDD 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98962g00001 115 Gene3D ABC transporter type 1, transmembrane domain 58 115 IPR036640 GO:0005524|GO:0016020
Trme98962g00001 115 MobiDBLite consensus disorder prediction 1 62 - -
Trme98962g00001 115 Coils Coil 39 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98962g00001 Trme-Chr98962 349 695 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98962g00001 60 109 Calmodulin-binding Proteins AT2G36910 43.396 3.98e-08 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98962g00001 K05658 - gmx:100779000 176.022