Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98817g00001 ATGCATGGAAAGGTACCTTCTACTGCAGTTGCTGGAGGGATGGTTAATGCTGGGCCACGAGATGGTGTTCATTCACAACTTTGGCTACAGGATGAAAGGGAGCTTAAAAGACAAAGGCGGAAACAGTCTAATAGGGAATCTGCACGTAGATCCAGGTTGCGAAAACAGGCTGAATGTGATGAACTAGCTCAGCGTGCTGAGGTTTTGAATGAAGAAAATGCCTCTCTCCGTGCTGAACTGAGCCGGATCAAGAGTGAGTACGAGAAGGCACTTTCTGAGAATGCAGCTCTCAAG 294 0.4762 MHGKVPSTAVAGGMVNAGPRDGVHSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEVLNEENASLRAELSRIKSEYEKALSENAALK 98
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98817g00001 98 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 39 54 IPR004827 GO:0003700|GO:0006355
Trme98817g00001 98 Gene3D - 35 97 - -
Trme98817g00001 98 FunFam BZIP transcription factor 34 85 - -
Trme98817g00001 98 MobiDBLite consensus disorder prediction 26 41 - -
Trme98817g00001 98 Coils Coil 52 98 - -
Trme98817g00001 98 CDD bZIP_plant_GBF1 37 87 IPR045314 GO:0003700|GO:0006355
Trme98817g00001 98 Pfam bZIP transcription factor 32 94 IPR004827 GO:0003700|GO:0006355
Trme98817g00001 98 SUPERFAMILY Leucine zipper domain 35 89 IPR046347 GO:0003700|GO:0006355
Trme98817g00001 98 MobiDBLite consensus disorder prediction 1 57 - -
Trme98817g00001 98 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 34 97 IPR004827 GO:0003700|GO:0006355
Trme98817g00001 98 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 98 IPR044827 GO:0003700|GO:0006355|GO:0043565
Trme98817g00001 98 SMART brlzneu 32 96 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98817g00001 Trme-Chr98817 174 634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98817g00001 1 98 bZIP Transcription Factor Family AT2G35530 74.490 2.06e-43 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trme98817g00001 bZIP_1 2.3e-20 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98817g00001 K09060 - gmx:100101912 164.851