Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98783g00001 ATGAGTGCACTCCCAAATCTGGCTTCTATATTAGACGCGACAGTAGCGGCTACTCGGATTTTCGAGATGATTGACAGAAAGCCAACTATAAACTCTACCAAAGAAAAAGGAAGGATTTTGAAGCATACAAGAGGAGAGATTATATTTAAAGAGGTTGAGTTTAGTTACCCTTCAAGGCCAGATACACCGATTCTCCAAGGACTCAATCTTAAAGTTCAGGCATGTAAAACAGTAGGACTAGTTGGAGGAAGTGGTTCTGGCAAATCTACTATAATCTCTTTACTTGAAAGATTCTATGAGCCTACATGTGGTGAGATATTACTTGATGGACATGATATAAAGAGACTGCACCTTAAGTGGTTTAGRTCTCTGATAGGATTGGTAAATCAAGAGCCAATTCTCTTTGCAACATCCATAAGAGAGAACATTCTATTTGGTAAGGAAGGAGCTTCAATGGAAGATGTAATAACCGCAGCGAAAGATGCAAATGCACATGATTTCATTGTTAAACTTCCTAATGGATATGAAACTCAA 534 0.382 MSALPNLASILDATVAATRIFEMIDRKPTINSTKEKGRILKHTRGEIIFKEVEFSYPSRPDTPILQGLNLKVQACKTVGLVGGSGSGKSTIISLLERFYEPTCGEILLDGHDIKRLHLKWFRSLIGLVNQEPILFATSIRENILFGKEGASMEDVITAAKDANAHDFIVKLPNGYETQ 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98783g00001 178 Gene3D - 37 178 IPR027417 -
Trme98783g00001 178 PANTHER ABC TRANSPORTER B FAMILY 2 178 IPR039421 -
Trme98783g00001 178 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 37 177 IPR027417 -
Trme98783g00001 178 Pfam ABC transporter 65 169 IPR003439 GO:0005524
Trme98783g00001 178 Gene3D ABC transporter type 1, transmembrane domain 2 36 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98783g00001 Trme-Chr98783 81 614 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98783g00001 5 178 Calmodulin-binding Proteins AT2G36910 55.172 1.06e-56 189