Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98782g00001 ATGCCAGAAAGGTTTCTTATTACTGATGAAAATGGAAAAGAGAGTCCTGTTGTTGAAGTTAGGGGACAAAATTATGAGCTTATGCCTTTTGGAAGTGGTAGAAGAATGTGTCCTGGTACTTCAGTAGCACTAAATGTTGCTCACACCACCCTTGCAAATATGATTCATTGCTTTGAATGGAAGATTGAAGATGGAGGGAAAGTTTGTGTTGACATGAATGAGGGTCCTTCCTTTATTCTTTCAAGAGCTCAACCACTTATTTGCTTCCCAACACCAAG 278 0.3957 MPERFLITDENGKESPVVEVRGQNYELMPFGSGRRMCPGTSVALNVAHTTLANMIHCFEWKIEDGGKVCVDMNEGPSFILSRAQPLICFPTP 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98782g00001 92 Pfam Cytochrome P450 1 88 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme98782g00001 92 Gene3D Cytochrome P450 1 88 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme98782g00001 92 PANTHER CYTOCHROME P450 82C3-RELATED 1 91 - -
Trme98782g00001 92 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 30 39 IPR017972 GO:0005506|GO:0016705
Trme98782g00001 92 SUPERFAMILY Cytochrome P450 1 92 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98782g00001 Trme-Chr98782 355 632 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98782g00001 1 91 Cytochrome P450 AT2G42250 42.857 1.13e-21 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98782g00001 K24188 - tpra:123896058 189.504