Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98725g00001 ATGTGTTCCCTGAAGAAGCTAATTCTTTCTGGCTGCTGTGAATTTGAATTCCTTCCCGAGTTTGGAGGAAAAATGGAAAATCTCTCAATACTTGCTTTAGAAGGAACAGCTATAAGAAAACTGCCCTCGTCACTTGGATGCCTAGTTGGACTTACTAATTTGAACTTAAATGATTGCAAAAGTCTTGTTTGTCTTCCAGATACAATTCATGGATTGAAATCCCTCATAATTCTTGACATTTCTAGATGCTCAAAAATCTATAGATTGCCAGATGGTTTGAAGGAAATCAAGAGTTTGGAGGAACTCCATGCCAATGATACTGCTATTGATGAACTACCTTCCTCCATTTTTTATCTAGATAGTCTTAAAGTATTATCATTTTCTGGTTGCAAAGGGCCATTGACCAAGTCAATGAACTGGTTTCTTCCCTTCAATTCGATGTTTGGGAGTCGACCAGATTCCACTGGATTCAGATTTCCAACTTCTGTCTTGAGCTTCCCTTCTTTGAAACGTCTAAACCTAAGTTACTGTAATCTTTCTGAAGAATCAATCCC 554 0.3791 MCSLKKLILSGCCEFEFLPEFGGKMENLSILALEGTAIRKLPSSLGCLVGLTNLNLNDCKSLVCLPDTIHGLKSLIILDISRCSKIYRLPDGLKEIKSLEELHANDTAIDELPSSIFYLDSLKVLSFSGCKGPLTKSMNWFLPFNSMFGSRPDSTGFRFPTSVLSFPSLKRLNLSYCNLSEESIP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98725g00001 185 Pfam Leucine Rich Repeat 168 180 IPR001611 GO:0005515
Trme98725g00001 185 Gene3D Ribonuclease Inhibitor 1 185 IPR032675 -
Trme98725g00001 185 SUPERFAMILY RNI-like 3 181 - -
Trme98725g00001 185 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 2 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98725g00001 Trme-Chr98725 1 554 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98725g00001 3 127 WRKY Transcription Factor Family AT4G12020 40.800 3.87e-16 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98725g00001 - - gmx:100815486 243.817