Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98694g00001 ATGAGCCCTGGATGGACATTAGGATGGACATGGGGGAAGAAAGAAATCATATGGGCCATGATGGGAGCACAAGCTACAGAACAAGGAGACTGTGCAAAGTTCAAGTTAAAGATTCCTCATAGTTGCAAAAGAAGTCCTCAAGTTGTTGATTTATTACCCGGAGCTTCGTTCAATATGCAATACACAAACTGTTGCAAAGGTGGTGTGTTAACCTCTTGGGGACAAGATCCTTCAGGTGCAATCGCGGCATTTCAGATGGGTGTAGGACTCTCTGGAAGAACTAACAAGACGGTGAAACTCCCTCAGGATTTTAAATTGCTTGGACCGGGAGCCGGATATTCGTGTGGCCCTGCTAAGAGAGTTCCTTCAACTGTTATTCTTACAGATGACCGTAGGCGAAAAGCTCAAGCTTTGAGTATGCATTCTAATTCCCTTTGTTAA 441 0.4444 MSPGWTLGWTWGKKEIIWAMMGAQATEQGDCAKFKLKIPHSCKRSPQVVDLLPGASFNMQYTNCCKGGVLTSWGQDPSGAIAAFQMGVGLSGRTNKTVKLPQDFKLLGPGAGYSCGPAKRVPSTVILTDDRRRKAQALSMHSNSLC 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98694g00001 146 PANTHER PROTEIN COBRA 1 143 IPR006918 GO:0010215|GO:0016020
Trme98694g00001 146 Pfam COBRA-like protein 2 140 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98694g00001 Trme-Chr98694 78 518 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98694g00001 2 138 COBRA Gene Family AT5G15630 69.343 4.72e-72 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98694g00001 - - gmx:100813134 262.692