Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98631g00001 ATGCTTGGTGAAGTTTTATACCCGCTAGTAGAGAAGATTGAGCATGGTGGAGCTGCAAAGGTTACAGGGATGCTTTTGGAGATGGACCAGCCTGAGGTGTTACATCTGATTGAGTCACCAGAGGCTCTCAAGACAAAAGTTGCTGAGGCCATGGATGTGTTGAGAAATGTTAGCCCAACTGATCAACTGGCATCTCTCTCTCTTAATGACAATCTCGAGTCTTAG 225 0.4578 MLGEVLYPLVEKIEHGGAAKVTGMLLEMDQPEVLHLIESPEALKTKVAEAMDVLRNVSPTDQLASLSLNDNLES 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98631g00001 74 SUPERFAMILY PABC (PABP) domain 1 62 IPR036053 GO:0003723
Trme98631g00001 74 Gene3D - 1 58 - -
Trme98631g00001 74 SMART poly_2 1 57 IPR002004 GO:0003723
Trme98631g00001 74 Pfam Poly-adenylate binding protein, unique domain 1 54 IPR002004 GO:0003723
Trme98631g00001 74 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 1 59 IPR002004 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98631g00001 Trme-Chr98631 102 326 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98631g00001 1 69 Eukaryotic Initiation Factors Gene Family AT4G34110 76.389 7.70e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98631g00001 K13126 - gmx:100784442 119.783