Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme985g00001 GAGAATGATAAGGAGGTATTGATGAATATGTTGTTGTCGTCTGGTAGTGATACGAGATGTAATTATAACAACAACTTAGGTGTGATTGCAATTTTAGGTTTCGGAGGTGTCGGTAAAACAACACTTGCTGAACTTGTTTATAATGATAAACAAGTTAATCAGCATTTTGATTTGAAAACCTGGGTTCGTGTATCAGAGGATTTTGATATTGTGAGAGTAATCAAAGCTCTCATTGCTTCTGTATGTCCATTTATGTACGAAAGCAATGATGTTGATTATCTTCGACTTACATTAAAGCAAAAGTTGAATTCTAGAAGATTTTTGTTTGTGTTGGATGACCTGTCGAATGTTGGTTATAATGATTGGCATGAGTTGGTAATGCCCTTGGTCAATGGAAAATTTGGTAGTAGGGTGATCATCACGACGCGCCAAGAAAGAGTTGCAGAGGTCGCACATACATTTCCTATTCATAAGTTAGAACCTTTGTCATACGAAGACTGTTGGTCTTTACTATCTAAGCATGCATTTGGAAGTGAAAATTATGGTGGCAATAAATACCCAAATCTAGAAGCAATTGGCAGGAAAATTGCAAAAAAGTGTCGAGGATTGCCACTAGCTGCCAAAACACTTGGTGGACTTTTGTCTTCAAAGGTAGATGCAAAGGATTGGATGGCAATTTTGATCAACAATTTGTGGAATATACCAGATGATAATATTCTTCCATCTTTGCTTTTGAGTTATCAACATCTTCCTTCTCATTTGAAAAGATGCTTTGCCTATTGCTCAATTTTTCCGAAGGGTTATCTCTTTGATAGGAAGCAATTAATTTTGTTGTGGATGGCAGAAGGCTTTCTTGAAAATTCTCAAGGTGAAAAAGCACCGGAAGAAGTAGGTGATGACTATTTTGTTGAATTGTTATCAAGATCCTTCATTCAAGAATTGAAATATGACACTAGGAGAATTTTTTTTGTGATGCACGAGCTTCTCTATGATCTAGCTGTGGTTGTATCTGGGAAAAGTTGTTGCAGACTTGAATGTGGTGGTAGCATCTCTAAACATATTCACCATTTGTCTTGTATTCAAGAGGAGTATGACACTTTCAAGAAGTTTGAGATTTTCTCCGACTTCAAATGCTTGCGGAGCTTCTTGCCCATTAGCGTTCAGTGGTGGCAACAATATTATTTATCTAGAAAGGTGGTTGATGATTTGTTACCCACAGTCAGAAGTTTGCGTGTGCTATCCTTATCACATTATGAAAACTTCACCATGTTACCAGATTCAATTTCTAACTTGTTGCATTTGCGGTATCTCGATCTCTCCTACACTAAAATCAAAAGCTTGCCTGATTCAACATGTGACCTTTACTATTTGCAAACCTTGAACTTATCATCGTGTTTCTTACTCACTGAATTGCCGGTAGATATTGGAAAGTTAATTAATTTACGCCACCTTAGTGTTACAAGAATTTGCAAGATGCCAATGCAAATTGTTGGACTTGAAAACCTTCAAACTTTAACTGATTTTGTAGTGGGCGAGCCAGAAGTTGGACTAAGTGTGAGAGAGCTTGGGAAATTTCCTAACCTACGGGGAAAACTTTCCATCGAAAATCTGAATAATGTCATTGATGTCAGTGAAGCGTGTGATGCCAACATGAAGAGCAAAGAACACCTTGAGGAGTTAGAGCTATACTGGGACCAAAACTTTGAAGATTCGCCAATAGACAAAGTAGTTCTTGATGTGTTGCAACCATCGATAAACTTGAAGAAATTGACCATTGGCTTATATGGCGGTACCAGTTTTCCAAGTTGGTTGGGAGATTCTTCGTTTTCTAACATGGTGTACTTGCACATAGGTGTTTGTGAGTATTGTGTGGCACTTCCACCACTAGGGCAACTACCTTCTCTCAAGGATCTACATATAGAACTTATGTCAATATTGGAGACAATTGGCCCAGAGTTCTATGGCGTGTCAAGCGGAGGTTCTAATTCTCCATTCCAACCATTTCCATCCTTGGAGTGTTTAAATTTTTCCGACATGTCTAATTGGAAGGAGTGGTTTCCGTTTAAAGGTAGAAAATTTCCTTTCCCTCAGCTTAAAACTTTGAAGTTAGATAACTGTCCTAAACTGAGGGGTCATTTGCCTTGTCATCTTGCTTCCATAGAAGAGATTGCAATAAACGATTGCGATAGTCTACTGGAAACGTCACCGAATCAGCATTGGCTTTCCTTAGTAAAATCTTTAGATGTGAATTCTCGAGGAACTAAATGGTCGTTTTTTGGATGTGATTCTTCATGTGTTCTGCAGCGTGTAAAAGTATGGAACTTTGAGACAATGTTGCCTCTACCTAAAATGTTATTGAGAACAACTTCTCTTCAACACTTGGTACTCTATAATATTCCATCTCTCACTGCACTTCCAGATGATGGTCTATCCACTTTTTTGCAGTCGCTTCGTATTACTAGCTGTGAGAATTTAGCATTCCCTCCGCCTGAAAAATGGAGCAATTACACATCACTTGTGACTTTGGAGTTGGTGTGTTGTGATGCACNATTACACATCACTTGTCACTTTGGAGTTGGTGTGTTGTGA 2589 0.3832 ENDKEVLMNMLLSSGSDTRCNYNNNLGVIAILGFGGVGKTTLAELVYNDKQVNQHFDLKTWVRVSEDFDIVRVIKALIASVCPFMYESNDVDYLRLTLKQKLNSRRFLFVLDDLSNVGYNDWHELVMPLVNGKFGSRVIITTRQERVAEVAHTFPIHKLEPLSYEDCWSLLSKHAFGSENYGGNKYPNLEAIGRKIAKKCRGLPLAAKTLGGLLSSKVDAKDWMAILINNLWNIPDDNILPSLLLSYQHLPSHLKRCFAYCSIFPKGYLFDRKQLILLWMAEGFLENSQGEKAPEEVGDDYFVELLSRSFIQELKYDTRRIFFVMHELLYDLAVVVSGKSCCRLECGGSISKHIHHLSCIQEEYDTFKKFEIFSDFKCLRSFLPISVQWWQQYYLSRKVVDDLLPTVRSLRVLSLSHYENFTMLPDSISNLLHLRYLDLSYTKIKSLPDSTCDLYYLQTLNLSSCFLLTELPVDIGKLINLRHLSVTRICKMPMQIVGLENLQTLTDFVVGEPEVGLSVRELGKFPNLRGKLSIENLNNVIDVSEACDANMKSKEHLEELELYWDQNFEDSPIDKVVLDVLQPSINLKKLTIGLYGGTSFPSWLGDSSFSNMVYLHIGVCEYCVALPPLGQLPSLKDLHIELMSILETIGPEFYGVSSGGSNSPFQPFPSLECLNFSDMSNWKEWFPFKGRKFPFPQLKTLKLDNCPKLRGHLPCHLASIEEIAINDCDSLLETSPNQHWLSLVKSLDVNSRGTKWSFFGCDSSCVLQRVKVWNFETMLPLPKMLLRTTSLQHLVLYNIPSLTALPDDGLSTFLQSLRITSCENLAFPPPEKWSNYTSLVTLELVCCDAXLHITCHFGVGVL 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme985g00001 862 Gene3D - 162 246 IPR042197 -
Trme985g00001 862 Gene3D - 247 334 IPR036388 -
Trme985g00001 862 PRINTS Disease resistance protein signature 101 115 - -
Trme985g00001 862 PRINTS Disease resistance protein signature 693 709 - -
Trme985g00001 862 PRINTS Disease resistance protein signature 200 214 - -
Trme985g00001 862 PRINTS Disease resistance protein signature 28 43 - -
Trme985g00001 862 Gene3D - 1 154 IPR027417 -
Trme985g00001 862 FunFam Probable disease resistance protein At1g63360 247 335 - -
Trme985g00001 862 Gene3D Ribonuclease Inhibitor 371 757 IPR032675 -
Trme985g00001 862 SUPERFAMILY L domain-like 717 848 - -
Trme985g00001 862 ProSiteProfiles Leucine-rich repeat profile. 433 454 IPR001611 GO:0005515
Trme985g00001 862 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 261 IPR027417 -
Trme985g00001 862 SUPERFAMILY L domain-like 324 758 - -
Trme985g00001 862 Pfam NB-ARC domain 23 233 IPR002182 GO:0043531
Trme985g00001 862 PANTHER DISEASE RESISTANCE PROTEIN RP 6 729 IPR044974 GO:0006952
Trme985g00001 862 Pfam Leucine rich repeat 408 465 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme985g00001 Trme-Chr985 200 2788 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme985g00001 17 535 WRKY Transcription Factor Family AT5G45050 24.132 2.46e-09 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme985g00001 - - vvo:131593200 1187.94