Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme981560g00001 ATGAAGATAGCTCTTGATGCTGCCAAGGGTCTGGCTTTTCTTCACAGTAATGAAGTCGAAGTGATACATGGAGATTTCAAAACTTCTAATATCTTGATTGATTAT 105 0.3619 MKIALDAAKGLAFLHSNEVEVIHGDFKTSNILIDY 35
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme981560g00001 35 Gene3D Transferase(Phosphotransferase) domain 1 1 35 - -
Trme981560g00001 35 ProSitePatterns Serine/Threonine protein kinases active-site signature. 21 33 IPR008271 GO:0004672|GO:0006468
Trme981560g00001 35 ProSiteProfiles Protein kinase domain profile. 1 35 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme981560g00001 35 PANTHER OS01G0588500 PROTEIN-RELATED 1 34 - -
Trme981560g00001 35 SUPERFAMILY Protein kinase-like (PK-like) 2 34 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme981560g00001 Trme-Chr981560 58 162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme981560g00001 1 34 Receptor kinase-like Gene Family AT4G02010 65.714 1.42e-09 48.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Trme981560g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme981560g00001 - - gmx:100305440 60.077