Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme980671g00001 ATGGCGCCGGAGGTGGCGCGTGGCGAGGAACAGGGGTTTGCTGCTGATGTATGGGCTTTGGCGTGTACTATGTTGGAGATGATCACCGGGAAAATGCCGTGGGGTGGAGTTTCTGATCCGGCGGCT 126 0.5952 MAPEVARGEEQGFAADVWALACTMLEMITGKMPWGGVSDPAA 42
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme980671g00001 42 SUPERFAMILY Protein kinase-like (PK-like) 1 38 IPR011009 -
Trme980671g00001 42 Gene3D Transferase(Phosphotransferase) domain 1 1 42 - -
Trme980671g00001 42 ProSiteProfiles Protein kinase domain profile. 1 42 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme980671g00001 42 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 38 - -
Trme980671g00001 42 Pfam Protein kinase domain 1 36 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme980671g00001 Trme-Chr980671 1 126 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme980671g00001 1 42 MAP Kinase Kinase Kinase AT4G26890 69.048 3.56e-16 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Trme980671g00001 Pkinase 3.7e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme980671g00001 K20716 - qsu:112036531 74.7146