Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme98050g00001 CCTGACATAACAGCTCCCGGAATCAACATATTGGCTGCTTATTCACTAGCCACTAGTCCTTCCAATCTACCATCAGATACACGTCGAGTTCCTTACAATCTGCAACAAGGAACTTCTATGTCTTGTCCTCATGTTGCTGGCATTGCTGGTCTTCTCAAGACACTTCATCCTAATTGGAGTCCAGCAGCTATCAAATCAGCCATCATGACTACCGCTACCACACTAGATAACACCAATCAACCGATTCAGAACGCTTTCAATAATATATCAACTCCATTTGAATATGGTTCAGGACATATTCAACCTAACCTTGCAATGGATCCAGGACTTGTTTATGATCTAACCACAACCGAT 354 0.4237 PDITAPGINILAAYSLATSPSNLPSDTRRVPYNLQQGTSMSCPHVAGIAGLLKTLHPNWSPAAIKSAIMTTATTLDNTNQPIQNAFNNISTPFEYGSGHIQPNLAMDPGLVYDLTTTD 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme98050g00001 118 Pfam Subtilase family 1 79 IPR000209 GO:0006508|GO:0008236
Trme98050g00001 118 Gene3D Peptidase S8/S53 domain 1 118 IPR036852 GO:0004252|GO:0006508
Trme98050g00001 118 ProSiteProfiles Serine proteases, subtilase domain profile. 1 106 - -
Trme98050g00001 118 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 118 IPR045051 -
Trme98050g00001 118 ProSitePatterns Serine proteases, subtilase family, serine active site. 37 47 IPR023828 -
Trme98050g00001 118 SUPERFAMILY Subtilisin-like 2 114 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme98050g00001 Trme-Chr98050 179 698 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme98050g00001 1 118 Subtilisin-like Serine Gene Family AT5G59810 62.712 2.91e-49 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme98050g00001 - - vum:124826760 205.297