Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme97985g00001 ATGAATCCGAAAATTTCAGATTTTGGCTTGGCAAAAATTTGTGGGGATGATCAAGTTGAAGGGAATACAAACAAAGTAGTCGGGACACATGGTTATATGGCTCCTGAGTATGCCATTGACGGACTATTCTCTATAAAATCAGATGTATTTAGTTTTGGAATATTATTGCTAGAGATTGTGAGTGGAAGGAAAAATAAAGGACTTAGCTATCCAAGAAACAATGACAATCTTGTTGGAAATGCTTGGAGATTGTGGAAAGAAGGTAGCTCAAAAGAATTGGTTGATGATTGTTTCGGGGAATCTTATATTCTATCCGAAGCTTTACGATGCATACAAGTTGGTCTTTTATGTCTACAACAACATCCAAGTGATAGACCTAATATG 384 0.362 MNPKISDFGLAKICGDDQVEGNTNKVVGTHGYMAPEYAIDGLFSIKSDVFSFGILLLEIVSGRKNKGLSYPRNNDNLVGNAWRLWKEGSSKELVDDCFGESYILSEALRCIQVGLLCLQQHPSDRPNM 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme97985g00001 128 SUPERFAMILY Protein kinase-like (PK-like) 1 128 IPR011009 -
Trme97985g00001 128 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 128 - -
Trme97985g00001 128 ProSiteProfiles Protein kinase domain profile. 1 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme97985g00001 128 Pfam Protein tyrosine and serine/threonine kinase 4 70 IPR001245 GO:0004672|GO:0006468
Trme97985g00001 128 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme97985g00001 Trme-Chr97985 50 584 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme97985g00001 1 128 Receptor kinase-like Gene Family AT4G23280 58.915 3.87e-48 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme97985g00001 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme97985g00001 - - tpra:123915417 261.536